RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 NFE4Q86UQ8 179 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 PRORYQ9H606 182 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 DPM3Q9P2X0 92 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 Q9UFV3 132 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 E7EQL1 145 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 TMEM78Q5T7P6 136 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 SMIM2Q9BVW6 85 aa12.5□□□□□ -0.41
UPK3B-202ENST00000334348 SLC25A16P16260 332 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 UBE2D1P51668 147 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 ORMDL2Q53FV1 153 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 TOMM6Q96B49 74 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 SCGB3A1Q96QR1 104 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 AGPAT4-IT1Q9H0P7 198 aa12.49□□□□□ -0.41
UPK3B-202ENST00000334348 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 RNF182Q8N6D2 247 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 OR11H6Q8NGC7 330 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 ONECUT1Q9UBC0 465 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 SH3BGRL2Q9UJC5 107 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 MT-ATP8P03928 68 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 NDPQ00604 133 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
UPK3B-202ENST00000334348 HES1Q14469 280 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 Q6ZUT4 128 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 ROS1P08922 2347 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 TSPAN13O95857 204 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 PSMB2P49721 201 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 UBE2D3P61077 147 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 UBE2D2P62837 147 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 FHL3Q13643 280 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 ZGRF1Q86YA3 2104 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 PRADC1Q9BSG0 188 aa12.47□□□□□ -0.41
UPK3B-202ENST00000334348 IGHV3OR16-8A0A075B7F1 116 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 LYNX1G3V0Z9 82 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 BUB3O43684 328 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 LYNX1P0DP58 116 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 PPDPFLQ8WWR9 84 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 VCX2Q9H322 139 aa12.46□□□□□ -0.41
UPK3B-202ENST00000334348 ZNF815PA8K554 130 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 ADGRG4Q8IZF6 3080 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 LOC107984156A0A0G2JMH3 177 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 XGP55808 180 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 LYRM7Q5U5X0 104 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 ARL17AQ8IVW1 177 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 KLK15Q9H2R5 256 aa12.45□□□□□ -0.42
UPK3B-202ENST00000334348 COX6B1P14854 86 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 IGHV3-35A0A0C4DH35 117 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 B9A039 149 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 SUMO2P61956 95 aaKnown RBP12.44□□□□□ -0.42
UPK3B-202ENST00000334348 SRSF9Q13242 221 aaKnown RBP eCLIP12.44□□□□□ -0.42
UPK3B-202ENST00000334348 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
UPK3B-202ENST00000334348 FLNCQ14315 2725 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 CD7P09564 240 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 PLEKHB2Q96CS7 222 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 ZFAND3Q9H8U3 227 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 MRPL53Q96EL3 112 aaKnown RBP12.43□□□□□ -0.42
UPK3B-202ENST00000334348 VKORC1Q9BQB6 163 aa12.43□□□□□ -0.42
UPK3B-202ENST00000334348 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 SBSPONQ8IVN8 264 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 PTH2Q96A98 100 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 ERG28Q9UKR5 140 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 PKDREJQ9NTG1 2253 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 Q8NA96 180 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 RASL10AQ92737 203 aa12.42□□□□□ -0.42
UPK3B-202ENST00000334348 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 TRBV20-1A0A075B6N2 111 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 ODF3BA8MYP8 253 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 H3BVH4 76 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 PRR30Q53SZ7 412 aaPredicted RBP12.41□□□□□ -0.42
UPK3B-202ENST00000334348 C2orf66Q6UXQ4 117 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 C9orf47Q6ZRZ4 202 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 BBC3Q96PG8 261 aaPredicted RBP12.41□□□□□ -0.42
UPK3B-202ENST00000334348 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 Q6ZQT7 251 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 NDUFA11Q86Y39 141 aa12.41□□□□□ -0.42
UPK3B-202ENST00000334348 Q8N6K4 173 aa12.4□□□□□ -0.42
UPK3B-202ENST00000334348 IGHV3-66A0A0C4DH42 116 aa12.39□□□□□ -0.43
UPK3B-202ENST00000334348 CLPSL1A2RUU4 121 aa12.39□□□□□ -0.43
UPK3B-202ENST00000334348 TCL1BO95988 128 aa12.39□□□□□ -0.43
UPK3B-202ENST00000334348 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
UPK3B-202ENST00000334348 RNF183Q96D59 192 aa12.39□□□□□ -0.43
UPK3B-202ENST00000334348 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 A8MWV9 139 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 PRB1P04280 392 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 FAM208BQ5VWN6 2430 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 LINC01548A6NM66 108 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 RNF223E7ERA6 249 aa12.38□□□□□ -0.43
UPK3B-202ENST00000334348 CLEC3BP05452 202 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms