RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 GTF2H5Q6ZYL4 71 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 NRACQ8N912 160 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 NRGNQ92686 78 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
BRCC3-201ENST00000330045 IGHV4-4A0A075B6R2 117 aa11.73□□□□□ -0.53
BRCC3-201ENST00000330045 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
BRCC3-201ENST00000330045 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
BRCC3-201ENST00000330045 JMJD8Q96S16 334 aa11.73□□□□□ -0.53
BRCC3-201ENST00000330045 LINC00527Q9UJ94 153 aa11.73□□□□□ -0.53
BRCC3-201ENST00000330045 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 DPM2O94777 84 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 LAGE3Q14657 143 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 FAM223BA6NKX1 122 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 FAM223AQ8IWN6 122 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 MYOZ3Q8TDC0 251 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 NAA38Q9BRA0 125 aaKnown RBP11.72□□□□□ -0.53
BRCC3-201ENST00000330045 MOB4Q9Y3A3 225 aa11.72□□□□□ -0.53
BRCC3-201ENST00000330045 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 GLMPQ8WWB7 406 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 GTSCR1Q86UQ5 136 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 TTTY13Q9BZ97 58 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 HIGD1BQ9P298 99 aa11.71□□□□□ -0.53
BRCC3-201ENST00000330045 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.54
BRCC3-201ENST00000330045 H3BVH4 76 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 ARL3P36405 182 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 C19orf54Q5BKX5 351 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 PRR9Q5T870 116 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 C20orf173Q96LM9 149 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 LENEPQ9Y5L5 61 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 IGHV3OR16-10A0A075B7F0 116 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 TM4SF20Q53R12 229 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 TMEM160Q9NX00 188 aa11.7□□□□□ -0.54
BRCC3-201ENST00000330045 TRAV40A0A0B4J280 105 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 K7EP34 96 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 VPS25Q9BRG1 176 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 IGF1P05019 195 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 GCSHP23434 173 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 CRIP2P52943 208 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-201ENST00000330045 MRAP2Q96G30 205 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
BRCC3-201ENST00000330045 MRPL35Q9NZE8 188 aaKnown RBP11.69□□□□□ -0.54
BRCC3-201ENST00000330045 J3KRW8 73 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 CHAC1Q9BUX1 264 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 TENM4Q6N022 2769 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 ABCA12Q86UK0 2595 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 A0A1W2PPM0 123 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 K7ERU9 68 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 SMIM13P0DJ93 91 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 UNQ9165/PRO28630Q6UXU0 137 aa11.68□□□□□ -0.54
BRCC3-201ENST00000330045 GPHB5Q86YW7 130 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 PTPN13Q12923 2485 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 FXYD2P54710 66 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
BRCC3-201ENST00000330045 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-201ENST00000330045 A0A087WX48 190 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 IGHV1-69DA0A0B4J2H0 117 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 NDUFA4O00483 81 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 HLA-DRB4P13762 266 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 ZFAND2AQ8N6M9 145 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 SMIM2Q9BVW6 85 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 HLA-DRB4X5D2U9 266 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 ZANQ9Y493 2812 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 TRAV21A0A0B4J279 112 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 OVOL1O14753 267 aa11.66□□□□□ -0.54
BRCC3-201ENST00000330045 M0R381 172 aa11.65□□□□□ -0.54
BRCC3-201ENST00000330045 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
BRCC3-201ENST00000330045 CCL19Q99731 98 aa11.65□□□□□ -0.54
BRCC3-201ENST00000330045 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.54
BRCC3-201ENST00000330045 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.65□□□□□ -0.54
BRCC3-201ENST00000330045 SOCS3O14543 225 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 SPRY2O43597 315 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 FABP2P12104 132 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 SAMD5Q5TGI4 173 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 PLNP26678 52 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 ASIPP42127 132 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 DEFB1P60022 68 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
BRCC3-201ENST00000330045 SAP30O75446 220 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 SUMO2P61956 95 aaKnown RBP11.63□□□□□ -0.55
BRCC3-201ENST00000330045 RPL11P62913 178 aaKnown RBP11.63□□□□□ -0.55
BRCC3-201ENST00000330045 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 CEND1Q8N111 149 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 TM2D2Q9BX73 214 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 DPH3P1Q9H4G8 78 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 MAPKAPK5-AS1Q8N8E1 139 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 RASL10AQ92737 203 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 USMG5Q96IX5 58 aa11.63□□□□□ -0.55
BRCC3-201ENST00000330045 PHLDA3Q9Y5J5 127 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms