RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 HLA-DMBP28068 263 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 LINC00173Q6ZV60 143 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 SONP18583 2426 aaKnown RBP12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 IGHV1-69DA0A0B4J2H0 117 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 IGHV1-69P01742 117 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 GP9P14770 177 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 IGFL2Q6UWQ7 119 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 MORN5Q5VZ52 161 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 Q96MF0 132 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 KLK9Q9UKQ9 250 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 C9orf153Q5TBE3 101 aa12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
MCF2L2-201ENST00000328913 K7EMI3 77 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 AGPAT4-IT1Q9H0P7 198 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 ZNF493Q6ZR52 646 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 BOD1L2Q8IYS8 172 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 DYNAPQ8N1N2 210 aa12.52□□□□□ -0.4
MCF2L2-201ENST00000328913 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
MCF2L2-201ENST00000328913 PRSS29PA6NIE9 313 aa12.52□□□□□ -0.41
MCF2L2-201ENST00000328913 LHBP01229 141 aa12.51□□□□□ -0.41
MCF2L2-201ENST00000328913 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
MCF2L2-201ENST00000328913 SCRT2Q9NQ03 307 aa12.51□□□□□ -0.41
MCF2L2-201ENST00000328913 CTSZQ9UBR2 303 aa12.51□□□□□ -0.41
MCF2L2-201ENST00000328913 LENEPQ9Y5L5 61 aa12.51□□□□□ -0.41
MCF2L2-201ENST00000328913 SHISA9B4DS77 424 aa12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 CR1LQ2VPA4 569 aa12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 IGKV1-17P01599 117 aa12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 SS18Q15532 418 aa12.5□□□□□ -0.41
MCF2L2-201ENST00000328913 SRSF2Q01130 221 aaKnown RBP12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 RBAKDNA6NC62 111 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 IFITM1P13164 125 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 SPANXDQ9BXN6 97 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 FREM1Q5H8C1 2179 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 SOCS3O14543 225 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 COL4A3Q01955 1670 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 IGLV2-14P01704 120 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 MRPL53Q96EL3 112 aaKnown RBP12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 RNF114Q9Y508 228 aa12.49□□□□□ -0.41
MCF2L2-201ENST00000328913 CFHR4Q92496 578 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 C22orf46C9J442 243 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 NCOR2Q9Y618 2525 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 GATA1P15976 413 aaPredicted RBP12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 UTF1Q5T230 341 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
MCF2L2-201ENST00000328913 MYO18BQ8IUG5 2567 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 DYSFO75923 2080 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 GTSF1Q8WW33 167 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 GAGE4Q13068 117 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 GAGE5Q13069 117 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 NTN5Q8WTR8 489 aaPredicted RBP12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 VWC2LB2RUY7 222 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 IGLL5B9A064 214 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 I3L2K1 104 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 FOXE3Q13461 319 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 CARD19Q96LW7 228 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 CFC1BP0CG36 223 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 CFC1P0CG37 223 aa12.47□□□□□ -0.41
MCF2L2-201ENST00000328913 IGKV1OR2-108A0A075B7D4 117 aa12.46□□□□□ -0.41
MCF2L2-201ENST00000328913 FRMD6-AS1P0C7T7 363 aa12.46□□□□□ -0.41
MCF2L2-201ENST00000328913 C3orf56Q8N813 242 aa12.46□□□□□ -0.41
MCF2L2-201ENST00000328913 K7EIM0 57 aa12.46□□□□□ -0.41
MCF2L2-201ENST00000328913 IGHV7-4-1A0A0J9YVY3 117 aa12.46□□□□□ -0.42
MCF2L2-201ENST00000328913 SPRNQ5BIV9 151 aa12.46□□□□□ -0.42
MCF2L2-201ENST00000328913 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 TAX1BP3O14907 124 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 SH2D6Q7Z4S9 175 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 RHOHQ15669 191 aa12.45□□□□□ -0.42
MCF2L2-201ENST00000328913 TCTEX1D4Q5JR98 221 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 FOXI2Q6ZQN5 318 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 MSRB1Q9NZV6 116 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 J3QLI3 93 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 PFN2P35080 140 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 SPRY4Q9C004 299 aa12.44□□□□□ -0.42
MCF2L2-201ENST00000328913 IGHV3-38A0A0C4DH36 116 aa12.43□□□□□ -0.42
MCF2L2-201ENST00000328913 GNRH2O43555 120 aa12.43□□□□□ -0.42
MCF2L2-201ENST00000328913 INS-IGF2F8WCM5 200 aa12.43□□□□□ -0.42
MCF2L2-201ENST00000328913 TMEM243Q9BU79 118 aa12.43□□□□□ -0.42
MCF2L2-201ENST00000328913 HIGD1BQ9P298 99 aa12.43□□□□□ -0.42
MCF2L2-201ENST00000328913 GAGE7O76087 117 aa12.42□□□□□ -0.42
MCF2L2-201ENST00000328913 GAGE12FP0CL80 117 aa12.42□□□□□ -0.42
MCF2L2-201ENST00000328913 GAGE12GP0CL81 117 aa12.42□□□□□ -0.42
MCF2L2-201ENST00000328913 GAGE12IP0CL82 117 aa12.42□□□□□ -0.42
MCF2L2-201ENST00000328913 DEFB121Q5J5C9 76 aa12.42□□□□□ -0.42
MCF2L2-201ENST00000328913 HERVK_113P63121 156 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms