RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 IGHV7-4-1A0A0J9YVY3 117 aa15.19■□□□□ 0.02
CRLF3-201ENST00000324238 LY6EQ16553 131 aa15.19■□□□□ 0.02
CRLF3-201ENST00000324238 SAMD5Q5TGI4 173 aa15.19■□□□□ 0.02
CRLF3-201ENST00000324238 FAM110DQ8TAY7 271 aaPredicted RBP15.19■□□□□ 0.02
CRLF3-201ENST00000324238 C16orf92Q96LL3 132 aa15.19■□□□□ 0.02
CRLF3-201ENST00000324238 C20orf173Q96LM9 149 aa15.19■□□□□ 0.02
CRLF3-201ENST00000324238 F6UB75 175 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 RPL11P62913 178 aaKnown RBP15.18■□□□□ 0.02
CRLF3-201ENST00000324238 RPL24P83731 157 aaKnown RBP15.18■□□□□ 0.02
CRLF3-201ENST00000324238 SCGB2A1O75556 95 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 IGHV3-11P01762 117 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 SMIM13P0DJ93 91 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 EBI3Q14213 229 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 CNFNQ9BYD5 112 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 HIF1ANQ9NWT6 349 aa15.18■□□□□ 0.02
CRLF3-201ENST00000324238 ABCA2Q9BZC7 2435 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 IGLV2-18A0A075B6J9 118 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 NRACQ8N912 160 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 DPM2O94777 84 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 SRD5A1P18405 259 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 UNQ9165/PRO28630Q6UXU0 137 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 NEGR1Q7Z3B1 354 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 Q8N8P6 123 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 METTL26Q96S19 204 aa15.17■□□□□ 0.02
CRLF3-201ENST00000324238 RPL39LQ96EH5 51 aaKnown RBP15.16■□□□□ 0.02
CRLF3-201ENST00000324238 FABP2P12104 132 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 MINOS1Q5TGZ0 78 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 C14orf178Q8N769 122 aaPredicted RBP15.15■□□□□ 0.02
CRLF3-201ENST00000324238 MYOZ3Q8TDC0 251 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 MINOS1-NBL1R4GNA1 71 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 TLN2Q9Y4G6 2542 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 GNLYP22749 145 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 LAGE3Q14657 143 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 ZMAT4Q9H898 229 aa15.15■□□□□ 0.02
CRLF3-201ENST00000324238 SMIM15Q7Z3B0 74 aa15.14■□□□□ 0.01
CRLF3-201ENST00000324238 SIVA1O15304 175 aa15.14■□□□□ 0.01
CRLF3-201ENST00000324238 AMTNQ6UX39 209 aa15.14■□□□□ 0.01
CRLF3-201ENST00000324238 CSTL1Q9H114 145 aa15.14■□□□□ 0.01
CRLF3-201ENST00000324238 LRRK2Q5S007 2527 aa15.13■□□□□ 0.01
CRLF3-201ENST00000324238 MGPP08493 103 aa15.13■□□□□ 0.01
CRLF3-201ENST00000324238 EEF1AKMT3Q96AZ1 226 aa15.13■□□□□ 0.01
CRLF3-201ENST00000324238 SLC50A1Q9BRV3 221 aa15.13■□□□□ 0.01
CRLF3-201ENST00000324238 CENPVL3A0A0U1RRI6 287 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 LMO4P61968 165 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 SFTA2Q6UW10 78 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 NPFFR1Q9GZQ6 430 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 UBE2E1P51965 193 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 EMP1P54849 157 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 ATP5G2Q06055 141 aa15.12■□□□□ 0.01
CRLF3-201ENST00000324238 ABCA12Q86UK0 2595 aa15.11■□□□□ 0.01
CRLF3-201ENST00000324238 GNRH2O43555 120 aa15.11■□□□□ 0.01
CRLF3-201ENST00000324238 S100A4P26447 101 aaKnown RBP15.11■□□□□ 0.01
CRLF3-201ENST00000324238 NPFFO15130 113 aa15.11■□□□□ 0.01
CRLF3-201ENST00000324238 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
CRLF3-201ENST00000324238 EDN2P20800 178 aa15.1■□□□□ 0.01
CRLF3-201ENST00000324238 C1orf122Q6ZSJ8 110 aa15.1■□□□□ 0.01
CRLF3-201ENST00000324238 TEX48A0A1B0GUV7 120 aa15.1■□□□□ 0.01
CRLF3-201ENST00000324238 OOSP1A8MZH6 123 aa15.1■□□□□ 0.01
CRLF3-201ENST00000324238 RNASE4P34096 147 aaKnown RBP15.1■□□□□ 0.01
CRLF3-201ENST00000324238 UCNP55089 124 aa15.1■□□□□ 0.01
CRLF3-201ENST00000324238 G3V4G9 280 aa15.09■□□□□ 0.01
CRLF3-201ENST00000324238 CEND1Q8N111 149 aa15.09■□□□□ 0.01
CRLF3-201ENST00000324238 TMEM190Q8WZ59 177 aa15.09■□□□□ 0.01
CRLF3-201ENST00000324238 HIST1H4GQ99525 98 aa15.09■□□□□ 0.01
CRLF3-201ENST00000324238 SETD2Q9BYW2 2564 aaPredicted RBP15.08■□□□□ 0.01
CRLF3-201ENST00000324238 ATP5LO75964 103 aa15.08■□□□□ 0
CRLF3-201ENST00000324238 C5orf56Q8N8D9 126 aa15.08■□□□□ 0
CRLF3-201ENST00000324238 ARL3P36405 182 aa15.08■□□□□ 0
CRLF3-201ENST00000324238 SRSF2Q01130 221 aaKnown RBP15.08■□□□□ 0
CRLF3-201ENST00000324238 SRSF1Q07955 248 aaKnown RBP eCLIP15.08■□□□□ 0
CRLF3-201ENST00000324238 WFDC2Q14508 124 aa15.08■□□□□ 0
CRLF3-201ENST00000324238 ARL6IP6Q8N6S5 226 aa15.08■□□□□ 0
CRLF3-201ENST00000324238 PHLDA1Q8WV24 401 aaPredicted RBP15.08■□□□□ 0
CRLF3-201ENST00000324238 RBAKDNA6NC62 111 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 H3BMG7 143 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 Q6ZS46 218 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 SCGB3A1Q96QR1 104 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 CYSLTR1Q9Y271 337 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 TRAV41A0A0B4J266 112 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 LINC01546A6NGU7 62 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.07■□□□□ 0
CRLF3-201ENST00000324238 ANXA2RQ3ZCQ2 193 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 GPHB5Q86YW7 130 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 JPT2Q9H910 190 aa15.07■□□□□ 0
CRLF3-201ENST00000324238 A0A087WX48 190 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 IGHV4-39P01824 125 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 C9orf47Q6ZRZ4 202 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 NRGNQ92686 78 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 RASL10AQ92737 203 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 NOTCH3Q9UM47 2321 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 MYO9AB2RTY4 2548 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 IGHV4-38-2P0DP08 117 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 RAB9AP51151 201 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 SH2D6Q7Z4S9 175 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 SMIM2Q9BVW6 85 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 PHLDA3Q9Y5J5 127 aa15.06■□□□□ 0
CRLF3-201ENST00000324238 PTPN13Q12923 2485 aa15.05■□□□□ 0
CRLF3-201ENST00000324238 IGHV4-61A0A0C4DH41 118 aa15.05■□□□□ 0
CRLF3-201ENST00000324238 ITLN2Q8WWU7 325 aaPredicted RBP15.05■□□□□ 0
CRLF3-201ENST00000324238 ZFAND2AQ8N6M9 145 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms