RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 KLK9Q2XQG4 91 aa13.26□□□□□ -0.29
COL9A1-201ENST00000320755 KLK9Q9UKQ9 250 aa13.26□□□□□ -0.29
COL9A1-201ENST00000320755 IGSF10Q6WRI0 2623 aa13.26□□□□□ -0.29
COL9A1-201ENST00000320755 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 OR1N2Q8NGR9 330 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 OR10J6PQ8NGY7 276 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 PRORYQ9H606 182 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 TMEM160Q9NX00 188 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 IGKV2D-26A0A0A0MRZ7 120 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
COL9A1-201ENST00000320755 GTSCR1Q86UQ5 136 aa13.25□□□□□ -0.29
COL9A1-201ENST00000320755 SFTPCP11686 197 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 ODF1Q14990 250 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 GPHB5Q86YW7 130 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 Q8N8P6 123 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 OR4X2Q8NGF9 303 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 C9orf139Q6ZV77 190 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 DEFB104AQ8WTQ1 72 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 NRGNQ92686 78 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 RNF151Q2KHN1 245 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
COL9A1-201ENST00000320755 EDN2P20800 178 aa13.23□□□□□ -0.29
COL9A1-201ENST00000320755 MRPL53Q96EL3 112 aaKnown RBP13.23□□□□□ -0.29
COL9A1-201ENST00000320755 C21orf62-AS1Q17RA5 79 aa13.23□□□□□ -0.29
COL9A1-201ENST00000320755 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
COL9A1-201ENST00000320755 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
COL9A1-201ENST00000320755 NRACQ8N912 160 aa13.23□□□□□ -0.29
COL9A1-201ENST00000320755 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
COL9A1-201ENST00000320755 C10orf105Q8TEF2 133 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 DPF1Q92782 380 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 AP1S3Q96PC3 154 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 K7EP13 123 aa13.22□□□□□ -0.29
COL9A1-201ENST00000320755 NDUFA4O00483 81 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 GNRH2O43555 120 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 LAGE3Q14657 143 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 ZFAND2AQ8N6M9 145 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 MYOZ3Q8TDC0 251 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 RHPN1-AS1Q9BWJ2 59 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 IGLV2-18A0A075B6J9 118 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 IGKCP01834 107 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 MGPP08493 103 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 ZC2HC1BQ5TFG8 222 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 PEF1Q9UBV8 284 aaKnown RBP13.21□□□□□ -0.29
COL9A1-201ENST00000320755 HHLA3Q9XRX5 114 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 CBY1Q9Y3M2 126 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 PHLDA3Q9Y5J5 127 aa13.21□□□□□ -0.29
COL9A1-201ENST00000320755 H3BUT2 72 aa13.21□□□□□ -0.3
COL9A1-201ENST00000320755 SEC11AP67812 179 aa13.21□□□□□ -0.3
COL9A1-201ENST00000320755 MEGF9Q9H1U4 602 aa13.21□□□□□ -0.3
COL9A1-201ENST00000320755 MRPL35Q9NZE8 188 aaKnown RBP13.21□□□□□ -0.3
COL9A1-201ENST00000320755 AVPP01185 164 aa13.2□□□□□ -0.3
COL9A1-201ENST00000320755 LINC00477Q96M19 166 aa13.2□□□□□ -0.3
COL9A1-201ENST00000320755 IGHG2P01859 326 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
COL9A1-201ENST00000320755 A6NDN8 102 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 GCSHP23434 173 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 ADAMTSL5Q6ZMM2 481 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 K7EMI3 77 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 DPM2O94777 84 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 HSD52Q0P140 79 aa13.19□□□□□ -0.3
COL9A1-201ENST00000320755 ANKRD17O75179 2603 aaKnown RBP13.19□□□□□ -0.3
COL9A1-201ENST00000320755 GAGE10A6NGK3 116 aa13.18□□□□□ -0.3
COL9A1-201ENST00000320755 MSMBP08118 114 aa13.18□□□□□ -0.3
COL9A1-201ENST00000320755 ASIPP42127 132 aa13.18□□□□□ -0.3
COL9A1-201ENST00000320755 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL9A1-201ENST00000320755 A6NDX4 124 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 OVOL1O14753 267 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 MAPK1IP1LQ8NDC0 245 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 USMG5Q96IX5 58 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 ABCA12Q86UK0 2595 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 PTPN13Q12923 2485 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 TLN2Q9Y4G6 2542 aa13.17□□□□□ -0.3
COL9A1-201ENST00000320755 ATP5LO75964 103 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 C10orf99Q6UWK7 81 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 SOCS3O14543 225 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 IGKV3-20P01619 116 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 MYO9AB2RTY4 2548 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 GAGE12BA1L429 117 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 CRIP2P52943 208 aaPredicted RBP13.16□□□□□ -0.3
COL9A1-201ENST00000320755 NEGR1Q7Z3B1 354 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 JMJD8Q96S16 334 aa13.16□□□□□ -0.3
COL9A1-201ENST00000320755 AGRNO00468 2067 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 RBX1P62877 108 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 SMIM2Q9BVW6 85 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 CST9LQ9H4G1 147 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 ZMAT4Q9H898 229 aa13.15□□□□□ -0.3
COL9A1-201ENST00000320755 IGHV4-4A0A075B6R2 117 aa13.14□□□□□ -0.31
COL9A1-201ENST00000320755 RASL10AQ92737 203 aa13.14□□□□□ -0.31
COL9A1-201ENST00000320755 DAZ1Q9NQZ3 744 aaKnown RBP13.14□□□□□ -0.31
COL9A1-201ENST00000320755 LENEPQ9Y5L5 61 aa13.14□□□□□ -0.31
COL9A1-201ENST00000320755 A0A0G2JLM5 398 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms