RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 Q8N1Y9 231 aa13.02□□□□□ -0.32
PACS1-201ENST00000320580 GFRALQ6UXV0 394 aa13.02□□□□□ -0.33
PACS1-201ENST00000320580 C7orf69Q9H7B7 122 aa13.02□□□□□ -0.33
PACS1-201ENST00000320580 ZNF71Q9NQZ8 489 aaPredicted RBP13.02□□□□□ -0.33
PACS1-201ENST00000320580 MYCNOSP40205 109 aa13.02□□□□□ -0.33
PACS1-201ENST00000320580 TRGV3P03979 118 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 DUX3Q96PT4 197 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.01□□□□□ -0.332e-8■■■■□ 24
PACS1-201ENST00000320580 CPAMD8Q8IZJ3 1885 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 RS1O15537 224 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 SPRNQ5BIV9 151 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 NCOR2Q9Y618 2525 aa13.01□□□□□ -0.33
PACS1-201ENST00000320580 VCYO14598 125 aa13□□□□□ -0.33
PACS1-201ENST00000320580 PIEZO2Q9H5I5 2752 aa13□□□□□ -0.33
PACS1-201ENST00000320580 LYPD2Q6UXB3 125 aa13□□□□□ -0.33
PACS1-201ENST00000320580 CFHR4Q92496 578 aa13□□□□□ -0.33
PACS1-201ENST00000320580 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
PACS1-201ENST00000320580 CD28P10747 220 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 SRD5A1P18405 259 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 CEACAM4O75871 244 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 CD7P09564 240 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 ID1P41134 155 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 SLC25A15Q9Y619 301 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 J3KT08 172 aa12.99□□□□□ -0.33
PACS1-201ENST00000320580 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 TRACP01848 142 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 A0A087WWL8 130 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 DYNAPQ8N1N2 210 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 A0A096LNJ9 63 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 RHODO00212 210 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 CD3EP07766 207 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 CRIP1P50238 77 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 HIST1H4AP62805 103 aaKnown RBP12.98□□□□□ -0.33
PACS1-201ENST00000320580 CDIP1Q9H305 208 aa12.98□□□□□ -0.33
PACS1-201ENST00000320580 EEF1AKMT3Q96AZ1 226 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 RITA1Q96K30 269 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 IGF2RP11717 2491 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 NFE4Q86UQ8 179 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 COL6A3P12111 3177 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 HHLA3Q9XRX5 114 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 FDCSPQ8NFU4 85 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 FAM110AQ9BQ89 295 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 TIMM21Q9BVV7 248 aa12.97□□□□□ -0.33
PACS1-201ENST00000320580 SPTBN4Q9H254 2564 aa12.96□□□□□ -0.33
PACS1-201ENST00000320580 LYNX1G3V0Z9 82 aa12.96□□□□□ -0.33
PACS1-201ENST00000320580 M0QXV9 152 aa12.96□□□□□ -0.33
PACS1-201ENST00000320580 LYNX1P0DP58 116 aa12.96□□□□□ -0.33
PACS1-201ENST00000320580 RPL39LQ96EH5 51 aaKnown RBP12.96□□□□□ -0.33
PACS1-201ENST00000320580 NDPQ00604 133 aa12.96□□□□□ -0.33
PACS1-201ENST00000320580 TRAV12-1A0A0B4J245 112 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 DUSP14O95147 198 aaKnown RBP12.95□□□□□ -0.34
PACS1-201ENST00000320580 C15orf32Q32M92 178 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 DUX5Q96PT3 197 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 IGHG4P01861 327 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
PACS1-201ENST00000320580 C5orf47Q569G3 176 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 U3KQK5 164 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 REV3LO60673 3130 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 TRBV7-3A0A075B6L6 115 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 BUB1B-PAK6H3BSN5 160 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
PACS1-201ENST00000320580 BAALCQ8WXS3 180 aa12.94□□□□□ -0.34
PACS1-201ENST00000320580 TRBV6-1A0A0K0K1D8 114 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 TRBV10-2A0A0K0K1G8 114 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 TMEM178BH3BS89 294 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 GAS8-AS1O95177 125 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 Q71RC1 249 aaPredicted RBP12.93□□□□□ -0.34
PACS1-201ENST00000320580 PIFOQ8TCI5 191 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 PRRC2CQ9Y520 2896 aaKnown RBP12.93□□□□□ -0.34
PACS1-201ENST00000320580 IGLV2-11P01706 119 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 BSPH1Q075Z2 132 aa12.93□□□□□ -0.34
PACS1-201ENST00000320580 MORN3Q6PF18 240 aaPredicted RBP12.93□□□□□ -0.34
PACS1-201ENST00000320580 TRGV11A0A075B6L2 103 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 CEP192Q8TEP8 1941 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 AGPAT4-IT1Q9H0P7 198 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 SDHAF1A6NFY7 115 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
PACS1-201ENST00000320580 TRAV13-1A0A0B4J241 112 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 CRYGCP07315 174 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 PF4V1P10720 104 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 C19orf54Q5BKX5 351 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 TEX36Q5VZQ5 186 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 ZNF625Q96I27 306 aaPredicted RBP12.91□□□□□ -0.34
PACS1-201ENST00000320580 MDS2Q8NDY4 140 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 INS-IGF2F8WCM5 200 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 NPFFO15130 113 aa12.91□□□□□ -0.34
PACS1-201ENST00000320580 PHLDA1Q8WV24 401 aaPredicted RBP12.91□□□□□ -0.34
PACS1-201ENST00000320580 I3L2K1 104 aa12.9□□□□□ -0.34
PACS1-201ENST00000320580 GATA4P43694 442 aa12.9□□□□□ -0.35
PACS1-201ENST00000320580 Q6ZQT7 251 aa12.9□□□□□ -0.35
PACS1-201ENST00000320580 PRSS33Q8NF86 280 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms