RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 VAMP8Q9BV40 100 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 U3KQE9 123 aa12.12□□□□□ -0.47
SHISA2-201ENST00000319420 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 AGRNO00468 2067 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 CFHR3Q02985 330 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 A0A087X0K7 114 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 RIGQ13278 110 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
SHISA2-201ENST00000319420 JMJD1CQ15652 2540 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 FXYD7P58549 80 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 FER1L6-AS1Q8NA97 138 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 ORAOV1Q8WV07 137 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 NCR2O95944 276 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 FAM106AQ4KMX7 169 aa12.1□□□□□ -0.47
SHISA2-201ENST00000319420 IGHV7-4-1A0A0J9YVY3 117 aa12.09□□□□□ -0.47
SHISA2-201ENST00000319420 C2orf70A6NJV1 201 aa12.09□□□□□ -0.47
SHISA2-201ENST00000319420 PRR9Q5T870 116 aa12.09□□□□□ -0.47
SHISA2-201ENST00000319420 MCRIP2Q9BUT9 160 aaKnown RBP12.09□□□□□ -0.47
SHISA2-201ENST00000319420 ZNF702PQ9H963 129 aa12.09□□□□□ -0.47
SHISA2-201ENST00000319420 IGHV1-24A0A0C4DH33 117 aa12.09□□□□□ -0.47
SHISA2-201ENST00000319420 H3BUA1 57 aa12.08□□□□□ -0.47
SHISA2-201ENST00000319420 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.47
SHISA2-201ENST00000319420 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.48
SHISA2-201ENST00000319420 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 A0A087WW49 117 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 ZNF688P0C7X2 276 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 COX8CQ7Z4L0 72 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 AKAP9Q99996 3911 aa12.08□□□□□ -0.48
SHISA2-201ENST00000319420 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
SHISA2-201ENST00000319420 D6R8Y8 96 aa12.07□□□□□ -0.48
SHISA2-201ENST00000319420 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
SHISA2-201ENST00000319420 SMPXQ9UHP9 88 aa12.07□□□□□ -0.48
SHISA2-201ENST00000319420 A0A1W2PRX2 142 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 CTRLP40313 264 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 RIPPLY3P57055 190 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 SPATA45Q537H7 98 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 OCIAD2Q56VL3 154 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 C9orf139Q6ZV77 190 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 FSHBP01225 129 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
SHISA2-201ENST00000319420 LRRC75A-AS1Q8N1F1 130 aa12.06□□□□□ -0.48
SHISA2-201ENST00000319420 FN1P02751 2386 aaKnown RBP12.06□□□□□ -0.48
SHISA2-201ENST00000319420 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 SLURP1P55000 103 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 HOXD3P31249 432 aaPredicted RBP12.05□□□□□ -0.48
SHISA2-201ENST00000319420 ERASQ7Z444 233 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 OR10AG1Q8NH19 301 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 SMR3AQ99954 134 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 YAE1D1Q9NRH1 226 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 UFC1Q9Y3C8 167 aa12.05□□□□□ -0.48
SHISA2-201ENST00000319420 GATD1Q8NB37 220 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 CST9LQ9H4G1 147 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 H3BVH4 76 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 PSMG4Q5JS54 123 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 PRSS3P2Q8NHM4 247 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 EVI2AP22794 236 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 Q6AWC8 147 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 ZNF493Q6ZR52 646 aa12.04□□□□□ -0.48
SHISA2-201ENST00000319420 CHCHD1Q96BP2 118 aaKnown RBP12.04□□□□□ -0.48
SHISA2-201ENST00000319420 SETXQ7Z333 2677 aaKnown RBP12.04□□□□□ -0.48
SHISA2-201ENST00000319420 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
SHISA2-201ENST00000319420 GATA1P15976 413 aaPredicted RBP12.03□□□□□ -0.48
SHISA2-201ENST00000319420 IFI27P40305 119 aaPredicted RBP12.03□□□□□ -0.48
SHISA2-201ENST00000319420 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
SHISA2-201ENST00000319420 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
SHISA2-201ENST00000319420 LEPROTL1O95214 131 aa12.02□□□□□ -0.48
SHISA2-201ENST00000319420 CKS2P33552 79 aa12.02□□□□□ -0.48
SHISA2-201ENST00000319420 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.48
SHISA2-201ENST00000319420 PRSS57Q6UWY2 283 aa12.02□□□□□ -0.48
SHISA2-201ENST00000319420 M0R381 172 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 SOCS3O14543 225 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 MRPL51Q4U2R6 128 aaKnown RBP12.02□□□□□ -0.49
SHISA2-201ENST00000319420 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 OR8A1Q8NGG7 326 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 ATP6V0BQ99437 205 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 MS4A6AQ9H2W1 248 aa12.02□□□□□ -0.49
SHISA2-201ENST00000319420 TRAV26-2A0A0B4J265 109 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 RBAKDNA6NC62 111 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 TMEM70Q9BUB7 260 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 TRAV12-2A0A075B6T6 113 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 FBLL1A6NHQ2 334 aaKnown RBP12.01□□□□□ -0.49
SHISA2-201ENST00000319420 S100A4P26447 101 aaKnown RBP12.01□□□□□ -0.49
SHISA2-201ENST00000319420 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 PRELID3AQ96N28 172 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 OTOGQ6ZRI0 2925 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 A0A1B0GW15 77 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 OR11H1Q8NG94 326 aa12.01□□□□□ -0.49
SHISA2-201ENST00000319420 LGALS1P09382 135 aaKnown RBP12□□□□□ -0.49
SHISA2-201ENST00000319420 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 GNRH2O43555 120 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 IGLC3P0DOY3 106 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 FA2HQ7L5A8 372 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 DEFB104AQ8WTQ1 72 aa12□□□□□ -0.49
SHISA2-201ENST00000319420 ESM1Q9NQ30 184 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms