RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 CFHR4Q92496 578 aa14.97□□□□□ -0.01
UBE2N-201ENST00000318066 EGR2P11161 476 aaPredicted RBP14.97□□□□□ -0.01
UBE2N-201ENST00000318066 ORMDL1Q9P0S3 153 aa14.97□□□□□ -0.01
UBE2N-201ENST00000318066 DUX4L9Q6RFH8 374 aaPredicted RBP14.97□□□□□ -0.01
UBE2N-201ENST00000318066 HIGD1BQ9P298 99 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 DOCK9Q9BZ29 2069 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 NXPH4O95158 308 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 FOXE3Q13461 319 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 TRAV12-2A0A075B6T6 113 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 C3orf56Q8N813 242 aa14.96□□□□□ -0.01
UBE2N-201ENST00000318066 SP5Q6BEB4 398 aaPredicted RBP14.96□□□□□ -0.02
UBE2N-201ENST00000318066 DOCK8Q8NF50 2099 aa14.95□□□□□ -0.02
UBE2N-201ENST00000318066 DYNAPQ8N1N2 210 aa14.95□□□□□ -0.02
UBE2N-201ENST00000318066 CACNA1HO95180 2353 aa14.95□□□□□ -0.02
UBE2N-201ENST00000318066 RNF138Q8WVD3 245 aa14.95□□□□□ -0.02
UBE2N-201ENST00000318066 DOCK10Q96BY6 2186 aa14.95□□□□□ -0.02
UBE2N-201ENST00000318066 DIDO1Q9BTC0 2240 aaKnown RBP14.94□□□□□ -0.02
UBE2N-201ENST00000318066 FAM215AQ9Y5M1 114 aa14.94□□□□□ -0.02
UBE2N-201ENST00000318066 YLPM1P49750 1951 aaKnown RBP14.94□□□□□ -0.02
UBE2N-201ENST00000318066 TRAV25A0A0B4J276 109 aa14.94□□□□□ -0.02
UBE2N-201ENST00000318066 IGHV3-38A0A0C4DH36 116 aa14.94□□□□□ -0.02
UBE2N-201ENST00000318066 K7ERJ3 54 aa14.94□□□□□ -0.02
UBE2N-201ENST00000318066 NPBQ8NG41 125 aa14.94□□□□□ -0.02
UBE2N-201ENST00000318066 BAALC-AS2P0C853 105 aa14.93□□□□□ -0.02
UBE2N-201ENST00000318066 CR1LQ2VPA4 569 aa14.93□□□□□ -0.02
UBE2N-201ENST00000318066 ZNF524Q96C55 264 aa14.93□□□□□ -0.02
UBE2N-201ENST00000318066 GP9P14770 177 aa14.93□□□□□ -0.02
UBE2N-201ENST00000318066 CRYBA4P53673 196 aa14.93□□□□□ -0.02
UBE2N-201ENST00000318066 IGLL5B9A064 214 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 KRTAP27-1Q3LI81 207 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 AMTNQ6UX39 209 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 TRAV12-1A0A0B4J245 112 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 CFHR3Q02985 330 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 C11orf53Q8IXP5 236 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 THSD7BQ9C0I4 1608 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 ANGP03950 147 aaKnown RBP14.92□□□□□ -0.02
UBE2N-201ENST00000318066 SH2D6Q7Z4S9 175 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 SS18L2Q9UHA2 77 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 NBASA2RRP1 2371 aa14.92□□□□□ -0.02
UBE2N-201ENST00000318066 USF3Q68DE3 2245 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 TEX48A0A1B0GUV7 120 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 WISP1O95388 367 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 LHBP01229 141 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 MED14OSP0DP75 135 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 HEATR5AQ86XA9 2040 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 FNDC1Q4ZHG4 1894 aaPredicted RBP14.91□□□□□ -0.02
UBE2N-201ENST00000318066 Q9H8V8 135 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 B5MCH6 92 aa14.91□□□□□ -0.02
UBE2N-201ENST00000318066 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 PLA2G2CQ5R387 149 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 ZNF407Q9C0G0 2248 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 NOTCH3Q9UM47 2321 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 TRBV6-1A0A0K0K1D8 114 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 DIAPH2-AS1Q14236 149 aa14.9□□□□□ -0.02
UBE2N-201ENST00000318066 PCP2Q8IVA1 136 aa14.89□□□□□ -0.03
UBE2N-201ENST00000318066 DOCK7Q96N67 2140 aa14.89□□□□□ -0.03
UBE2N-201ENST00000318066 I3L2K1 104 aa14.89□□□□□ -0.03
UBE2N-201ENST00000318066 VPREB3Q9UKI3 123 aa14.89□□□□□ -0.03
UBE2N-201ENST00000318066 C22orf46C9J442 243 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 IGF2BP2-AS1Q96M15 143 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 CENPVL3A0A0U1RRI6 287 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 TEN1Q86WV5 123 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 LYPD6Q86Y78 171 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 C17orf77Q96MU5 243 aa14.88□□□□□ -0.03
UBE2N-201ENST00000318066 U3KQE9 123 aa14.87□□□□□ -0.03
UBE2N-201ENST00000318066 IGLV11-55A0A075B6I3 123 aa14.87□□□□□ -0.03
UBE2N-201ENST00000318066 HOXB4P17483 251 aaPredicted RBP14.87□□□□□ -0.03
UBE2N-201ENST00000318066 PRR30Q53SZ7 412 aaPredicted RBP14.87□□□□□ -0.03
UBE2N-201ENST00000318066 DAZ2Q13117 558 aaKnown RBP14.87□□□□□ -0.03
UBE2N-201ENST00000318066 DAZ4Q86SG3 579 aaKnown RBP14.87□□□□□ -0.03
UBE2N-201ENST00000318066 DAZ3Q9NR90 486 aaKnown RBP14.87□□□□□ -0.03
UBE2N-201ENST00000318066 ATOX1O00244 68 aa14.87□□□□□ -0.03
UBE2N-201ENST00000318066 GNRH2O43555 120 aa14.86□□□□□ -0.03
UBE2N-201ENST00000318066 FUSP35637 526 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBE2N-201ENST00000318066 CRYGCP07315 174 aa14.86□□□□□ -0.03
UBE2N-201ENST00000318066 IGKV1-17P01599 117 aa14.86□□□□□ -0.03
UBE2N-201ENST00000318066 SMIM20Q8N5G0 67 aa14.86□□□□□ -0.03
UBE2N-201ENST00000318066 CTSZQ9UBR2 303 aa14.86□□□□□ -0.03
UBE2N-201ENST00000318066 K7EIM0 57 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 RBM3P98179 157 aaKnown RBP14.85□□□□□ -0.03
UBE2N-201ENST00000318066 TINCRA0A1B0GVN0 87 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 NBL1P41271 181 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 Q96MF0 132 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 TIMM17AQ99595 171 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 A0A0B4J2C4 111 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 ZFP2Q6ZN57 461 aa14.85□□□□□ -0.03
UBE2N-201ENST00000318066 IGFL2Q6UWQ7 119 aa14.84□□□□□ -0.03
UBE2N-201ENST00000318066 PLXNA2O75051 1894 aa14.84□□□□□ -0.03
UBE2N-201ENST00000318066 F6UB75 175 aa14.84□□□□□ -0.03
UBE2N-201ENST00000318066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.84□□□□□ -0.036e-8■■■■□ 24.1
UBE2N-201ENST00000318066 C16orf54Q6UWD8 224 aa14.83□□□□□ -0.03
UBE2N-201ENST00000318066 C16orf74Q96GX8 76 aa14.83□□□□□ -0.04
UBE2N-201ENST00000318066 K7EMT4 169 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 MALRD1Q5VYJ5 2156 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 ANKRD39Q53RE8 183 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 TSC2P49815 1807 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 BUB3O43684 328 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 COL4A6Q14031 1691 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 JMJD7-PLA2G4BH0Y9G9 81 aa14.82□□□□□ -0.04
UBE2N-201ENST00000318066 H3BT86 120 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms