RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GLMPQ8WWB7 406 aa14.55□□□□□ -0.08
RTN4-201ENST00000317610 K7EMI3 77 aa14.54□□□□□ -0.08
RTN4-201ENST00000317610 C20orf78Q9BR46 151 aa14.54□□□□□ -0.08
RTN4-201ENST00000317610 SAA4P35542 130 aa14.54□□□□□ -0.08
RTN4-201ENST00000317610 C16orf92Q96LL3 132 aa14.54□□□□□ -0.08
RTN4-201ENST00000317610 TLN1Q9Y490 2541 aaKnown RBP14.53□□□□□ -0.08
RTN4-201ENST00000317610 NEXN-AS1Q8NBZ9 246 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 RASL10AQ92737 203 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 C20orf173Q96LM9 149 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 HIST1H4GQ99525 98 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 SPANXB1Q9NS25 103 aaPredicted RBP14.53□□□□□ -0.08
RTN4-201ENST00000317610 AGRNO00468 2067 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 MYMXA0A1B0GTQ4 84 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 SUMO2P61956 95 aaKnown RBP14.53□□□□□ -0.08
RTN4-201ENST00000317610 ATP5G2Q06055 141 aa14.53□□□□□ -0.08
RTN4-201ENST00000317610 CHTOPQ9Y3Y2 248 aaKnown RBP14.53□□□□□ -0.08
RTN4-201ENST00000317610 RRN3P1Q2M238 152 aa14.52□□□□□ -0.08
RTN4-201ENST00000317610 ZFAND2AQ8N6M9 145 aa14.52□□□□□ -0.08
RTN4-201ENST00000317610 C5orf56Q8N8D9 126 aa14.52□□□□□ -0.08
RTN4-201ENST00000317610 LINC00477Q96M19 166 aa14.52□□□□□ -0.08
RTN4-201ENST00000317610 OR11H12B2RN74 326 aa14.52□□□□□ -0.09
RTN4-201ENST00000317610 OR11H1Q8NG94 326 aa14.52□□□□□ -0.09
RTN4-201ENST00000317610 OR11H2Q8NH07 326 aa14.52□□□□□ -0.09
RTN4-201ENST00000317610 SCGB3A1Q96QR1 104 aa14.52□□□□□ -0.09
RTN4-201ENST00000317610 C19orf54Q5BKX5 351 aa14.51□□□□□ -0.09
RTN4-201ENST00000317610 DPH3P1Q9H4G8 78 aa14.51□□□□□ -0.09
RTN4-201ENST00000317610 HRNRQ86YZ3 2850 aaPredicted RBP14.51□□□□□ -0.09
RTN4-201ENST00000317610 RNF223E7ERA6 249 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 M0R381 172 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 IGF1P05019 195 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 NBL1P41271 181 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 WFDC2Q14508 124 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 TRAV21A0A0B4J279 112 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 MED14OSP0DP75 135 aa14.5□□□□□ -0.09
RTN4-201ENST00000317610 FAM223BA6NKX1 122 aa14.49□□□□□ -0.09
RTN4-201ENST00000317610 GPHB5Q86YW7 130 aa14.49□□□□□ -0.09
RTN4-201ENST00000317610 FAM223AQ8IWN6 122 aa14.49□□□□□ -0.09
RTN4-201ENST00000317610 ZFHX2Q9C0A1 2572 aaPredicted RBP14.49□□□□□ -0.09
RTN4-201ENST00000317610 SOCS3O14543 225 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 CRIP2P52943 208 aaPredicted RBP14.48□□□□□ -0.09
RTN4-201ENST00000317610 PRO0461Q9UI25 63 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 H3BMG7 143 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 OVOL1O14753 267 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 NPFFO15130 113 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 LGALS1P09382 135 aaKnown RBP14.48□□□□□ -0.09
RTN4-201ENST00000317610 FOXC1Q12948 553 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 BAALCQ8WXS3 180 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 RPL39LQ96EH5 51 aaKnown RBP14.48□□□□□ -0.09
RTN4-201ENST00000317610 FAM19A4Q96LR4 140 aa14.48□□□□□ -0.09
RTN4-201ENST00000317610 SCGB1A1P11684 91 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 ASIPP42127 132 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 SAMD13Q5VXD3 122 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 KLK15Q9H2R5 256 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 PTPRQQ9UMZ3 2332 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 TRAV41A0A0B4J266 112 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 A0A1W2PPR1 153 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 C2orf66Q6UXQ4 117 aa14.47□□□□□ -0.09
RTN4-201ENST00000317610 J3QR89 54 aa14.46□□□□□ -0.09
RTN4-201ENST00000317610 CD300EQ496F6 205 aaPredicted RBP14.46□□□□□ -0.09
RTN4-201ENST00000317610 APRG1Q8IVJ8 170 aa14.46□□□□□ -0.09
RTN4-201ENST00000317610 POM121L12Q8N7R1 296 aa14.46□□□□□ -0.09
RTN4-201ENST00000317610 OR10J6PQ8NGY7 276 aa14.46□□□□□ -0.09
RTN4-201ENST00000317610 SPOCK3Q9BQ16 436 aa14.46□□□□□ -0.09
RTN4-201ENST00000317610 C14orf178Q8N769 122 aaPredicted RBP14.46□□□□□ -0.1
RTN4-201ENST00000317610 RAXQ9Y2V3 346 aa14.46□□□□□ -0.1
RTN4-201ENST00000317610 S100A4P26447 101 aaKnown RBP14.45□□□□□ -0.1
RTN4-201ENST00000317610 ARL3P36405 182 aa14.45□□□□□ -0.1
RTN4-201ENST00000317610 LMO4P61968 165 aa14.45□□□□□ -0.1
RTN4-201ENST00000317610 MORN3Q6PF18 240 aaPredicted RBP14.45□□□□□ -0.1
RTN4-201ENST00000317610 PHLDA3Q9Y5J5 127 aa14.45□□□□□ -0.1
RTN4-201ENST00000317610 PPP1R17O96001 155 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 ANXA2RQ3ZCQ2 193 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 GAGE13Q4V321 117 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 AMTNQ6UX39 209 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 SIGMAR1Q99720 223 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 PRADC1Q9BSG0 188 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 MOB4Q9Y3A3 225 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 PRSS29PA6NIE9 313 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 J3KRW8 73 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 SPRY2O43597 315 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 SPATA25Q9BR10 227 aa14.44□□□□□ -0.1
RTN4-201ENST00000317610 TSSC4Q9Y5U2 329 aaPredicted RBP14.44□□□□□ -0.1
RTN4-201ENST00000317610 NDUFA4O00483 81 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 COX6B1P14854 86 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 UNQ9165/PRO28630Q6UXU0 137 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 CYSLTR1Q9Y271 337 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 TRBV7-9A0A0J9YWB2 115 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 GAGE12HA6NDE8 117 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 HOXA3O43365 443 aaPredicted RBP14.43□□□□□ -0.1
RTN4-201ENST00000317610 NXPH4O95158 308 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 AZU1P20160 251 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 SH2D6Q7Z4S9 175 aa14.43□□□□□ -0.1
RTN4-201ENST00000317610 SPAG8Q99932 426 aaPredicted RBP14.43□□□□□ -0.1
RTN4-201ENST00000317610 ETDBQ3ZM63 59 aa14.42□□□□□ -0.1
RTN4-201ENST00000317610 RPL32P62910 135 aaKnown RBP14.42□□□□□ -0.1
RTN4-201ENST00000317610 KLRB1Q12918 225 aa14.42□□□□□ -0.1
RTN4-201ENST00000317610 MGPP08493 103 aa14.41□□□□□ -0.1
RTN4-201ENST00000317610 RNASE3P12724 160 aaKnown RBP14.41□□□□□ -0.1
RTN4-201ENST00000317610 TMEM219Q86XT9 240 aa14.41□□□□□ -0.1
RTN4-201ENST00000317610 GTSF1LQ9H1H1 148 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms