RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 Q5PR19 223 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 RNASE11Q8TAA1 199 aaKnown RBP5.78□□□□□ -1.48
CNOT4-201ENST00000315544 TMEM158Q8WZ71 300 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 LINC00467Q9BRT7 94 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 FBN3Q75N90 2809 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 TMEM89A2RUT3 159 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 M0R381 172 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 TSPEAR-AS2P59090 65 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 Q8N8P6 123 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 OR5T1Q8NG75 326 aa5.78□□□□□ -1.48
CNOT4-201ENST00000315544 SPTAN1Q13813 2472 aaKnown RBP5.77□□□□□ -1.49
CNOT4-201ENST00000315544 CST9LQ9H4G1 147 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 C16orf95Q9H693 158 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 ATP6V0E1O15342 81 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 P01737 135 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 PRR27Q6MZM9 219 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 ODF3Q96PU9 254 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 RBM7Q9Y580 266 aaKnown RBP5.77□□□□□ -1.49
CNOT4-201ENST00000315544 M0R2Z0 102 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 TNFSF4P23510 183 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 SUB1P53999 127 aaKnown RBP eCLIP5.77□□□□□ -1.49
CNOT4-201ENST00000315544 FXYD2P54710 66 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 KRTDAPP60985 99 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 TMEM86BQ8N661 226 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 ARPC1AQ92747 370 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 SPAG8Q99932 426 aaPredicted RBP5.77□□□□□ -1.49
CNOT4-201ENST00000315544 PPDPFQ9H3Y8 114 aa5.77□□□□□ -1.49
CNOT4-201ENST00000315544 A1L4Q6 167 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 K7EMI3 77 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 K7EP34 96 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 ORM2P19652 201 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 BAGE3Q86Y29 109 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 CCL17Q92583 94 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 SPATA25Q9BR10 227 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 LGALS9O00182 355 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 CCDC144NLQ6NUI1 221 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 BPIFA4PQ86YQ2 179 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 SPATA3Q8NHX4 192 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 FAM103A1Q9BTL3 118 aaKnown RBP5.76□□□□□ -1.49
CNOT4-201ENST00000315544 OCIAD2Q56VL3 154 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 KPRPQ5T749 579 aaPredicted RBP5.76□□□□□ -1.49
CNOT4-201ENST00000315544 VHLLQ6RSH7 139 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 CSTL1Q9H114 145 aa5.76□□□□□ -1.49
CNOT4-201ENST00000315544 IGHV4-61A0A0C4DH41 118 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 H3BUA1 57 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 LEPROTL1O95214 131 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 SEC11AP67812 179 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 C8orf86Q6ZUL3 223 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 TRBV27A0A0K0K1C4 114 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 TCF21O43680 179 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 TNFRSF6BO95407 300 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 G0S2P27469 103 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 OR10AG1Q8NH19 301 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 Q8TAT8 98 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 PMCHL2Q9BQD1 86 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 RNF24Q9Y225 148 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 IL4P05112 153 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 Q56UQ5 140 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 Q6ZN92 141 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 RNF182Q8N6D2 247 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 KLK15Q9H2R5 256 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 CDIP1Q9H305 208 aa5.75□□□□□ -1.49
CNOT4-201ENST00000315544 PKD1P98161 4303 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 TRBV25-1A0A075B6N4 114 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 IGHV3-21A0A0B4J1V1 117 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 SMKR1H3BMG3 65 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 WIPF1O43516 503 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 NDUFA7O95182 113 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 BEAN1Q3B7T3 259 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 ZFP2Q6ZN57 461 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 BLNKQ8WV28 456 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 SPANXB1Q9NS25 103 aaPredicted RBP5.74□□□□□ -1.49
CNOT4-201ENST00000315544 A0A087WX48 190 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 OR9G4Q8NGQ1 327 aa5.74□□□□□ -1.49
CNOT4-201ENST00000315544 HTR1DP28221 377 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 GPR183P32249 361 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 PRNTQ86SH4 94 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 ZNRF2Q8NHG8 242 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 TRBV7-1A0A0A6YYK4 115 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 A0A1W2PPM0 123 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 RNASE4P34096 147 aaKnown RBP5.73□□□□□ -1.49
CNOT4-201ENST00000315544 IGFL4Q6B9Z1 124 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 Q96MF0 132 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 CLUHP3Q96NS8 147 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 TTTY13Q9BZ97 58 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 IGLV5-45A0A087WSX0 123 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 HINT1P49773 126 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-201ENST00000315544 ORMDL3Q8N138 153 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 RASL11BQ9BPW5 248 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 C21orf62Q9NYP8 219 aa5.73□□□□□ -1.49
CNOT4-201ENST00000315544 MAP1AP78559 2803 aaPredicted RBP5.73□□□□□ -1.49
CNOT4-201ENST00000315544 SAP30O75446 220 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 HBDP02042 147 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 CSN3P07498 182 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 AP5S1Q9NUS5 200 aa5.72□□□□□ -1.49
CNOT4-201ENST00000315544 RBMY1BA6NDE4 496 aaKnown RBP5.72□□□□□ -1.49
CNOT4-201ENST00000315544 RBMY1EA6NEQ0 496 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms