RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 TEX43Q6ZNM6 134 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 EBI3Q14213 229 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 HIST2H2BCQ6DN03 193 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 LURAP1LQ8IV03 231 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 HSD52Q0P140 79 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 KLF5Q13887 457 aaPredicted RBP4.76□□□□□ -1.65
PRKDC-201ENST00000314191 PTPRSQ13332 1948 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 C2CD3Q4AC94 2353 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 SDHAF1A6NFY7 115 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 IGHV3-16A0A0C4DH30 117 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF415Q09FC8 603 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 DKK2Q9UBU2 259 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 TMEM101Q96IK0 257 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
PRKDC-201ENST00000314191 MRAP2Q96G30 205 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 TOMM7Q9P0U1 55 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 KIAA1549LQ6ZVL6 1849 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 TRGV4A0A0C4DH28 118 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 DLEU1O43261 78 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 SMAGPQ0VAQ4 97 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 Q8N6K4 173 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 SPCS1Q9Y6A9 102 aa4.76□□□□□ -1.65
PRKDC-201ENST00000314191 IGHV4OR15-8A0A075B7B6 117 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 A0A087WW49 117 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 CDKN1BP46527 198 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 SLURP1P55000 103 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 RBAKDNA6NC62 111 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 HTN3P15516 51 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 MYCNOSP40205 109 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 LGALS9BQ3B8N2 356 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 LGALS9CQ6DKI2 356 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 Q6ZS46 218 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 APRG1Q8IVJ8 170 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 SPANXCQ9NY87 97 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 TP53TG3Q9ULZ0 132 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 OR9G4Q8NGQ1 327 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 CRXO43186 299 aaPredicted RBP4.75□□□□□ -1.65
PRKDC-201ENST00000314191 TMEM131Q92545 1883 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 CFHR3Q02985 330 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 MBD6Q96DN6 1003 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 SMIM2Q9BVW6 85 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 IGHV3-38A0A0C4DH36 116 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 RPL36AP83881 106 aaKnown RBP4.75□□□□□ -1.65
PRKDC-201ENST00000314191 C10orf99Q6UWK7 81 aa4.75□□□□□ -1.65
PRKDC-201ENST00000314191 RPL36ALQ969Q0 106 aaKnown RBP4.75□□□□□ -1.65
PRKDC-201ENST00000314191 MRPS16Q9Y3D3 137 aaKnown RBP4.74□□□□□ -1.65
PRKDC-201ENST00000314191 TRAV2A0A0B4J234 112 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 TRPT1Q86TN4 253 aaKnown RBP4.74□□□□□ -1.65
PRKDC-201ENST00000314191 MEGF9Q9H1U4 602 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 MRPL16Q9NX20 251 aaKnown RBP4.74□□□□□ -1.65
PRKDC-201ENST00000314191 SMAD5-AS1Q9Y6J3 95 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 DSCAMO60469 2012 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 INSP01308 110 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 CHAC1Q9BUX1 264 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 IGF1P05019 195 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
PRKDC-201ENST00000314191 LINC01559Q495D7 138 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 HIST2H2BDQ6DRA6 164 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 TTTY13Q9BZ97 58 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 LENEPQ9Y5L5 61 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 COX6CP09669 75 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 CHCHD5Q9BSY4 110 aa4.74□□□□□ -1.65
PRKDC-201ENST00000314191 AVPP01185 164 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 Q6ZVH6 145 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF48Q96MX3 618 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-201ENST00000314191 DEFB130BP0DP73 79 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 DEFB130AP0DP74 79 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 ZNRF2Q8NHG8 242 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 RPL39LQ96EH5 51 aaKnown RBP4.73□□□□□ -1.65
PRKDC-201ENST00000314191 SPXQ9BT56 116 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 SPANXDQ9BXN6 97 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 JPT2Q9H910 190 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 TTC28Q96AY4 2481 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 WFDC11Q8NEX6 87 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 LOXL1Q08397 574 aaPredicted RBP4.73□□□□□ -1.65
PRKDC-201ENST00000314191 CITED1Q99966 193 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 SEC11AP67812 179 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 MRPL52Q86TS9 123 aaKnown RBP4.73□□□□□ -1.65
PRKDC-201ENST00000314191 MYO9AB2RTY4 2548 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 GAGE12JA6NER3 117 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 GAGE1Q13065 139 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 GAGE4Q13068 117 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 GAGE5Q13069 117 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 GAGE13Q4V321 117 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 TRAV13-1A0A0B4J241 112 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 C9orf47Q6ZRZ4 202 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 ZNF479Q96JC4 524 aa4.73□□□□□ -1.65
PRKDC-201ENST00000314191 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 LINC01549A6NIU2 74 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 H3BRM9 83 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 NPC2P61916 151 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 CIRBPQ14011 172 aaKnown RBP4.72□□□□□ -1.65
PRKDC-201ENST00000314191 ZFAND3Q9H8U3 227 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 A0A1B0GXF2 115 aa4.72□□□□□ -1.65
PRKDC-201ENST00000314191 CITED2Q99967 270 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms