RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 LYZL1Q6UWQ5 148 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 GTSCR1Q86UQ5 136 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 ZNF575Q86XF7 245 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 C19orf73Q9NVV2 129 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 TRAPPC1Q9Y5R8 145 aa16.62■□□□□ 0.25
IRF3-201ENST00000309877 ZNF324O75467 553 aaPredicted RBP16.61■□□□□ 0.25
IRF3-201ENST00000309877 WDR73Q6P4I2 378 aa16.61■□□□□ 0.25
IRF3-201ENST00000309877 RASL11AQ6T310 242 aa16.61■□□□□ 0.25
IRF3-201ENST00000309877 FAM159AQ6UWV7 190 aa16.61■□□□□ 0.25
IRF3-201ENST00000309877 A0A1B0GUT8 65 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 IGLC6P0CF74 106 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 RAB4BP61018 213 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 RAB5BP61020 215 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 TRPT1Q86TN4 253 aaKnown RBP16.6■□□□□ 0.25
IRF3-201ENST00000309877 GNB1LQ9BYB4 327 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 AGRNO00468 2067 aa16.6■□□□□ 0.25
IRF3-201ENST00000309877 CAMPP49913 170 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 HBBP68871 147 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 RIGQ13278 110 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 FRZBQ92765 325 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 WFDC10AQ9H1F0 79 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 SNURFLB1AK76 121 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 ARMS2P0C7Q2 107 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 ZFP82Q8N141 532 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 KCNS1Q96KK3 526 aa16.59■□□□□ 0.25
IRF3-201ENST00000309877 F2Z2F3 143 aa16.58■□□□□ 0.24
IRF3-201ENST00000309877 NUTF2P61970 127 aaKnown RBP16.58■□□□□ 0.24
IRF3-201ENST00000309877 FABP9Q0Z7S8 132 aa16.58■□□□□ 0.24
IRF3-201ENST00000309877 A0A1B0GXF2 115 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 CRXO43186 299 aaPredicted RBP16.57■□□□□ 0.24
IRF3-201ENST00000309877 AMBPP02760 352 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 MT-ND6P03923 174 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 S100A4P26447 101 aaKnown RBP16.57■□□□□ 0.24
IRF3-201ENST00000309877 CTRLP40313 264 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 ASIPP42127 132 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 TMEM136Q6ZRR5 245 aa16.57■□□□□ 0.24
IRF3-201ENST00000309877 SSTP61278 116 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 MUC21A0A0G2JKD1 596 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 MUC21A0A140T8X8 626 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 A0A1B0GW15 77 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 GNRH2O43555 120 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 HLA-DQA1P01909 254 aa16.56■□□□□ 0.24
IRF3-201ENST00000309877 MRPL18Q9H0U6 180 aaKnown RBP16.56■□□□□ 0.24
IRF3-201ENST00000309877 IGHV1OR15-1A0A075B7D0 117 aa16.55■□□□□ 0.24
IRF3-201ENST00000309877 WIPF1O43516 503 aa16.55■□□□□ 0.24
IRF3-201ENST00000309877 S100A8P05109 93 aa16.55■□□□□ 0.24
IRF3-201ENST00000309877 DEFB125Q8N687 156 aa16.55■□□□□ 0.24
IRF3-201ENST00000309877 H3BVH4 76 aa16.54■□□□□ 0.24
IRF3-201ENST00000309877 INSP01308 110 aa16.54■□□□□ 0.24
IRF3-201ENST00000309877 TDRG1Q3Y452 100 aa16.54■□□□□ 0.24
IRF3-201ENST00000309877 TIMM8BQ9Y5J9 83 aaPredicted RBP16.54■□□□□ 0.24
IRF3-201ENST00000309877 XCL2Q9UBD3 114 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 VWFP04275 2813 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 PHOX2AO14813 284 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 OR5AL1P0C617 328 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 RPL35AP18077 110 aaKnown RBP16.53■□□□□ 0.24
IRF3-201ENST00000309877 TWIST1Q15672 202 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 PRR31Q5SQ13 230 aa16.53■□□□□ 0.24
IRF3-201ENST00000309877 SSBP4Q9BWG4 385 aaPredicted RBP16.53■□□□□ 0.24
IRF3-201ENST00000309877 SNAI2O43623 268 aa16.52■□□□□ 0.23
IRF3-201ENST00000309877 RBMY1A1P0DJD3 496 aaKnown RBP16.52■□□□□ 0.23
IRF3-201ENST00000309877 RBMY1CP0DJD4 496 aa16.52■□□□□ 0.23
IRF3-201ENST00000309877 NTF3P20783 257 aa16.52■□□□□ 0.23
IRF3-201ENST00000309877 RBMY1FQ15415 496 aaKnown RBP16.52■□□□□ 0.23
IRF3-201ENST00000309877 DNLZQ5SXM8 178 aa16.52■□□□□ 0.23
IRF3-201ENST00000309877 C20orf144Q9BQM9 153 aa16.52■□□□□ 0.23
IRF3-201ENST00000309877 APCSP02743 223 aa16.51■□□□□ 0.23
IRF3-201ENST00000309877 TRGC1P0CF51 173 aa16.51■□□□□ 0.23
IRF3-201ENST00000309877 CNFNQ9BYD5 112 aa16.51■□□□□ 0.23
IRF3-201ENST00000309877 MED14OSP0DP75 135 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 TP53TG3Q9ULZ0 132 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 CACNG7P62955 275 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 SPANXN1Q5VSR9 72 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 MORN3Q6PF18 240 aaPredicted RBP16.5■□□□□ 0.23
IRF3-201ENST00000309877 Q8N1Y9 231 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 OR10AG1Q8NH19 301 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 LINC01587Q99440 93 aa16.5■□□□□ 0.23
IRF3-201ENST00000309877 CBY3A6NI87 242 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BKO60814 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BJP06899 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HTN1P15515 57 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BOP23527 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BBP33778 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BDP58876 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BCP62807 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST2H2BEQ16778 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 OXLD1Q5BKU9 147 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BHQ93079 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BNQ99877 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 HIST1H2BMQ99879 126 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 PHLDA3Q9Y5J5 127 aa16.49■□□□□ 0.23
IRF3-201ENST00000309877 TRGV11A0A075B6L2 103 aa16.48■□□□□ 0.23
IRF3-201ENST00000309877 RNASE3P12724 160 aaKnown RBP16.48■□□□□ 0.23
IRF3-201ENST00000309877 TMEM208Q9BTX3 173 aa16.48■□□□□ 0.23
IRF3-201ENST00000309877 SLAQ13239 276 aa16.47■□□□□ 0.23
IRF3-201ENST00000309877 C1QTNF4Q9BXJ3 329 aa16.47■□□□□ 0.23
IRF3-201ENST00000309877 SCRT2Q9NQ03 307 aa16.47■□□□□ 0.23
IRF3-201ENST00000309877 IGHV3-16A0A0C4DH30 117 aa16.46■□□□□ 0.23
IRF3-201ENST00000309877 S100A6P06703 90 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms