RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 ANK3Q12955 4377 aaKnown RBP15.93■□□□□ 0.14
ATG4D-201ENST00000309469 FAM104BQ5XKR9 115 aa15.93■□□□□ 0.14
ATG4D-201ENST00000309469 NIT1Q86X76 327 aa15.93■□□□□ 0.14
ATG4D-201ENST00000309469 CD28P10747 220 aa15.92■□□□□ 0.14
ATG4D-201ENST00000309469 RNASE4P34096 147 aaKnown RBP15.92■□□□□ 0.14
ATG4D-201ENST00000309469 ZNF664Q8N3J9 261 aa15.92■□□□□ 0.14
ATG4D-201ENST00000309469 KRTDAPP60985 99 aa15.92■□□□□ 0.14
ATG4D-201ENST00000309469 C11orf44Q8N8P7 122 aa15.92■□□□□ 0.14
ATG4D-201ENST00000309469 AMN1Q8IY45 258 aa15.91■□□□□ 0.14
ATG4D-201ENST00000309469 URB1-AS1Q96HZ7 61 aa15.91■□□□□ 0.14
ATG4D-201ENST00000309469 MSRB1Q9NZV6 116 aa15.91■□□□□ 0.14
ATG4D-201ENST00000309469 RNF114Q9Y508 228 aa15.91■□□□□ 0.14
ATG4D-201ENST00000309469 KIR3DS1Q14943 382 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 TMEM191AQ9H0A3 160 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 MYO9AB2RTY4 2548 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 A0A0J9YX75 114 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 M0R2Z0 102 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 CSN3P07498 182 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 DDTP30046 118 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 CHCHD1Q96BP2 118 aaKnown RBP15.9■□□□□ 0.14
ATG4D-201ENST00000309469 RAX2Q96IS3 184 aa15.9■□□□□ 0.14
ATG4D-201ENST00000309469 KLLNB2CW77 178 aa15.89■□□□□ 0.13
ATG4D-201ENST00000309469 OR5AL1P0C617 328 aa15.89■□□□□ 0.13
ATG4D-201ENST00000309469 EBLN2Q6P2I7 272 aa15.89■□□□□ 0.13
ATG4D-201ENST00000309469 C14orf144Q96I85 54 aa15.89■□□□□ 0.13
ATG4D-201ENST00000309469 U3KQK5 164 aa15.88■□□□□ 0.13
ATG4D-201ENST00000309469 A0A1W2PRX2 142 aa15.88■□□□□ 0.13
ATG4D-201ENST00000309469 SNAI2O43623 268 aa15.88■□□□□ 0.13
ATG4D-201ENST00000309469 MRPL51Q4U2R6 128 aaKnown RBP15.88■□□□□ 0.13
ATG4D-201ENST00000309469 ODF3Q96PU9 254 aa15.88■□□□□ 0.13
ATG4D-201ENST00000309469 CITED2Q99967 270 aaPredicted RBP15.88■□□□□ 0.13
ATG4D-201ENST00000309469 ANXA2RQ3ZCQ2 193 aa15.87■□□□□ 0.13
ATG4D-201ENST00000309469 LBHQ53QV2 105 aaPredicted RBP15.87■□□□□ 0.13
ATG4D-201ENST00000309469 DMRTA1Q5VZB9 504 aa15.87■□□□□ 0.13
ATG4D-201ENST00000309469 OR10AG1Q8NH19 301 aa15.87■□□□□ 0.13
ATG4D-201ENST00000309469 D6R8Y8 96 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 LINC00614P0C842 121 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 FHL3Q13643 280 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 TEX43Q6ZNM6 134 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 JMJD8Q96S16 334 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 TSSC4Q9Y5U2 329 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-201ENST00000309469 TRAV2A0A0B4J234 112 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 CCL24O00175 119 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 C3orf79P0CE67 100 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 LEPP41159 167 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 ORMDL3Q8N138 153 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 DYNLRB2Q8TF09 96 aa15.86■□□□□ 0.13
ATG4D-201ENST00000309469 IGHV4-4A0A075B6R2 117 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 H3BVH4 76 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 DUSP14O95147 198 aaKnown RBP15.85■□□□□ 0.13
ATG4D-201ENST00000309469 NDUFA7O95182 113 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 CACNG7P62955 275 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 FOXI2Q6ZQN5 318 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 TMEM61Q8N0U2 210 aa15.85■□□□□ 0.13
ATG4D-201ENST00000309469 Q8N976 141 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 RNF185Q96GF1 192 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 PRELID3AQ96N28 172 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 IGKV3-20P01619 116 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 RAB4AP20338 218 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 ASIPP42127 132 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 DEFB114Q30KQ6 69 aa15.84■□□□□ 0.13
ATG4D-201ENST00000309469 IGHV1-24A0A0C4DH33 117 aa15.83■□□□□ 0.12
ATG4D-201ENST00000309469 CKS2P33552 79 aa15.83■□□□□ 0.12
ATG4D-201ENST00000309469 SPANXN1Q5VSR9 72 aa15.83■□□□□ 0.12
ATG4D-201ENST00000309469 S100A4P26447 101 aaKnown RBP15.82■□□□□ 0.12
ATG4D-201ENST00000309469 PMCHL1Q16048 86 aa15.82■□□□□ 0.12
ATG4D-201ENST00000309469 TIMM8BQ9Y5J9 83 aaPredicted RBP15.82■□□□□ 0.12
ATG4D-201ENST00000309469 C7orf71A4D174 169 aa15.82■□□□□ 0.12
ATG4D-201ENST00000309469 GNRH2O43555 120 aa15.82■□□□□ 0.12
ATG4D-201ENST00000309469 CUBNO60494 3623 aa15.82■□□□□ 0.12
ATG4D-201ENST00000309469 TRAV12-3A0A0B4J271 114 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 KIR2DL5BA0A0G2JN68 375 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 KIR2DL5BA0A0G2JPC4 375 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 MED14OSP0DP75 135 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 DEFB131AP59861 70 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 SMIM15Q7Z3B0 74 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 KIR2DL5AQ8N109 375 aa15.81■□□□□ 0.12
ATG4D-201ENST00000309469 SMKR1H3BMG3 65 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 EVI2AP22794 236 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 TSPOP30536 169 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 FAM159AQ6UWV7 190 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 PRSS3P2Q8NHM4 247 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 NF1P21359 2839 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 PPBPP02775 128 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 CDKN1BP46527 198 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 TDRG1Q3Y452 100 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 CD300EQ496F6 205 aaPredicted RBP15.8■□□□□ 0.12
ATG4D-201ENST00000309469 VAMP8Q9BV40 100 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 SCRT2Q9NQ03 307 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 OTOGQ6ZRI0 2925 aa15.8■□□□□ 0.12
ATG4D-201ENST00000309469 BTF3P20290 206 aaKnown RBP15.79■□□□□ 0.12
ATG4D-201ENST00000309469 PROK1P58294 105 aa15.79■□□□□ 0.12
ATG4D-201ENST00000309469 INAFM1C9JVW0 142 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 NCR2O95944 276 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 AMTNQ6UX39 209 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 FA2HQ7L5A8 372 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 NDUFAF3Q9BU61 184 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 AP5S1Q9NUS5 200 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 TRAV12-2A0A075B6T6 113 aa15.78■□□□□ 0.12
ATG4D-201ENST00000309469 LOC389332A0A1B0GUA5 103 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms