RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 TRAV41A0A0B4J266 112 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 RAB9AP51151 201 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 ZNF418Q8TF45 676 aaPredicted RBP13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 BUB3O43684 328 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 ASIPP42127 132 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 SRSF1Q07955 248 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 GTSF1LQ9H1H1 148 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 HOXB4P17483 251 aaPredicted RBP13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 SMAGPQ0VAQ4 97 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 ZNF479Q96JC4 524 aa13.44□□□□□ -0.26
CHRNA5-201ENST00000299565 CDKN1BP46527 198 aa13.43□□□□□ -0.26
CHRNA5-201ENST00000299565 OR1N2Q8NGR9 330 aa13.43□□□□□ -0.26
CHRNA5-201ENST00000299565 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
CHRNA5-201ENST00000299565 MRPL16Q9NX20 251 aaKnown RBP13.43□□□□□ -0.26
CHRNA5-201ENST00000299565 A0A096LNJ9 63 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 H3BRM9 83 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 J3QR89 54 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 NPBQ8NG41 125 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 NPFFO15130 113 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 Q1RN00 199 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 FAM159AQ6UWV7 190 aa13.42□□□□□ -0.26
CHRNA5-201ENST00000299565 TRBV25-1A0A075B6N4 114 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 H3BUX3 64 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 CD7P09564 240 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 RPL39LQ96EH5 51 aaKnown RBP13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 MSRB2Q9Y3D2 182 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 MTORP42345 2549 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 IGKV3D-20A0A0C4DH25 116 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 GNRH2O43555 120 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 ETDBQ3ZM63 59 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 DUX5Q96PT3 197 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 CHTOPQ9Y3Y2 248 aaKnown RBP13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 A0A1B0GWB2 263 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 H3BMG7 143 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 ADORA2A-AS1P86434 159 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 MINOS1Q5TGZ0 78 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 BOD1L2Q8IYS8 172 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 MINOS1-NBL1R4GNA1 71 aa13.41□□□□□ -0.26
CHRNA5-201ENST00000299565 OVOL3O00110 214 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 TRBV12-3P01733 135 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 ZNF56Q15929 161 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 A0A1W2PPM0 123 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 ATP5J2P56134 94 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 ZNF815PA8K554 130 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
CHRNA5-201ENST00000299565 C11orf21Q9P2W6 132 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 MAPK1IP1LQ8NDC0 245 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 DPF1Q92782 380 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 LINC00477Q96M19 166 aa13.39□□□□□ -0.27
CHRNA5-201ENST00000299565 K7EP34 96 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 ODF1Q14990 250 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 CSTL1Q9H114 145 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 UNQ9165/PRO28630Q6UXU0 137 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 Q8N8P6 123 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 DCHS2Q6V1P9 2916 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 TRAV21A0A0B4J279 112 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 F8W735 103 aaPredicted RBP13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 MRPS12O15235 138 aaKnown RBP13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 PSMB2P49721 201 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 ADAMTSL5Q6ZMM2 481 aa13.38□□□□□ -0.27
CHRNA5-201ENST00000299565 UBE2E1P51965 193 aa13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 BEX4Q9NWD9 120 aaPredicted RBP13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 SH2D6Q7Z4S9 175 aa13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 NPFFR1Q9GZQ6 430 aa13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 COL27A1Q8IZC6 1860 aaPredicted RBP13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 IGHV3-73A0A0B4J1V6 119 aa13.37□□□□□ -0.27
CHRNA5-201ENST00000299565 PRSS2P07478 247 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 TMEM95Q3KNT9 176 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 LY6G5BQ8NDX9 201 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 CCDC140Q96MF4 163 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 RHPN1-AS1Q9BWJ2 59 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 TRAV12-2A0A075B6T6 113 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 TEX48A0A1B0GUV7 120 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 BLCAPP62952 87 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 IGLC6P0CF74 106 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 SUMO2P61956 95 aaKnown RBP13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 C2orf66Q6UXQ4 117 aa13.36□□□□□ -0.27
CHRNA5-201ENST00000299565 FN1P02751 2386 aaKnown RBP13.35□□□□□ -0.27
CHRNA5-201ENST00000299565 KLHL30-AS1Q8NEE0 82 aa13.35□□□□□ -0.27
CHRNA5-201ENST00000299565 RNF185Q96GF1 192 aa13.35□□□□□ -0.27
CHRNA5-201ENST00000299565 PAX2Q02962 417 aa13.35□□□□□ -0.27
CHRNA5-201ENST00000299565 KIR2DL4Q99706 377 aa13.35□□□□□ -0.27
CHRNA5-201ENST00000299565 HIVEP2P31629 2446 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 CUBNO60494 3623 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 CENPVL3A0A0U1RRI6 287 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 OOSP1A8MZH6 123 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 CLEC2AQ6UVW9 174 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 OR5A1Q8NGJ0 315 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 JPT2Q9H910 190 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 PSMG4Q5JS54 123 aa13.34□□□□□ -0.27
CHRNA5-201ENST00000299565 TRBV7-1A0A0A6YYK4 115 aa13.33□□□□□ -0.27
CHRNA5-201ENST00000299565 SLC25A16P16260 332 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms