RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 LINC01560Q8TB33 94 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 TIMD4Q96H15 378 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 SRSF8Q9BRL6 282 aaKnown RBP8.83□□□□□ -1
TRUB1-201ENST00000298746 SPG11Q96JI7 2443 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 ATMQ13315 3056 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 IGKV3D-20A0A0C4DH25 116 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 PRSS47A8MTI9 375 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 ORMDL2Q53FV1 153 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 RNF5Q99942 180 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 SMIM2Q9BVW6 85 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 ZMAT4Q9H898 229 aa8.83□□□□□ -1
TRUB1-201ENST00000298746 BEX4Q9NWD9 120 aaPredicted RBP8.83□□□□□ -1
TRUB1-201ENST00000298746 A8MWV9 139 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 THBDP07204 575 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 CTSGP08311 255 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 C2orf66Q6UXQ4 117 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 Q6ZQT7 251 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 FAM90A27PA6NNH2 459 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 PIFOQ8TCI5 191 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 RAX2Q96IS3 184 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 METTL26Q96S19 204 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 SMAD5-AS1Q9Y6J3 95 aa8.82□□□□□ -1
TRUB1-201ENST00000298746 ZZEF1O43149 2961 aa8.81□□□□□ -1
TRUB1-201ENST00000298746 TRAV8-2A0A0B4J237 113 aa8.81□□□□□ -1
TRUB1-201ENST00000298746 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.81□□□□□ -1
TRUB1-201ENST00000298746 LGALS1P09382 135 aaKnown RBP8.81□□□□□ -1
TRUB1-201ENST00000298746 SUMO2P61956 95 aaKnown RBP8.81□□□□□ -1
TRUB1-201ENST00000298746 RPL39LQ96EH5 51 aaKnown RBP8.81□□□□□ -1
TRUB1-201ENST00000298746 B9A039 149 aa8.81□□□□□ -1
TRUB1-201ENST00000298746 TEX29Q8N6K0 151 aa8.81□□□□□ -1
TRUB1-201ENST00000298746 C11orf21Q9P2W6 132 aa8.81□□□□□ -1
TRUB1-201ENST00000298746 COLQQ9Y215 455 aaPredicted RBP8.81□□□□□ -1
TRUB1-201ENST00000298746 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
TRUB1-201ENST00000298746 SLC50A1Q9BRV3 221 aa8.8□□□□□ -1
TRUB1-201ENST00000298746 CEP295Q9C0D2 2601 aa8.8□□□□□ -1
TRUB1-201ENST00000298746 PPDPFLQ8WWR9 84 aa8.8□□□□□ -1
TRUB1-201ENST00000298746 PLEKHB2Q96CS7 222 aa8.8□□□□□ -1
TRUB1-201ENST00000298746 IGHV3-64A0A075B6Q5 118 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 ZNF672Q499Z4 452 aaPredicted RBP8.79□□□□□ -1
TRUB1-201ENST00000298746 Q6ZS92 163 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 TRBV7-3A0A075B6L6 115 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 TCTEX1D4Q5JR98 221 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 LINC00527Q9UJ94 153 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 ZFAND6Q6FIF0 208 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 RNF183Q96D59 192 aa8.79□□□□□ -1
TRUB1-201ENST00000298746 C9JAW5 83 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 PLA2G2CQ5R387 149 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 FAM74A4Q5TZK3 123 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 MORN3Q6PF18 240 aaPredicted RBP8.78□□□□□ -1
TRUB1-201ENST00000298746 Q6ZUT4 128 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 LGALS3P17931 250 aaKnown RBP8.78□□□□□ -1
TRUB1-201ENST00000298746 RNASE4P34096 147 aaKnown RBP8.78□□□□□ -1
TRUB1-201ENST00000298746 ASIPP42127 132 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 XGP55808 180 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 DEFB1P60022 68 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 NRACQ8N912 160 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 ZNF48Q96MX3 618 aaPredicted RBP8.78□□□□□ -1
TRUB1-201ENST00000298746 KIR2DL4Q99706 377 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 ATRXP46100 2492 aa8.78□□□□□ -1
TRUB1-201ENST00000298746 TSPAN13O95857 204 aa8.77□□□□□ -1
TRUB1-201ENST00000298746 NFE4Q86UQ8 179 aa8.77□□□□□ -1
TRUB1-201ENST00000298746 OR10J6PQ8NGY7 276 aa8.77□□□□□ -1
TRUB1-201ENST00000298746 TNRC18O15417 2968 aaPredicted RBP8.77□□□□□ -1
TRUB1-201ENST00000298746 G3V318 75 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 TNFRSF13BO14836 293 aaPredicted RBP8.77□□□□□ -1.01
TRUB1-201ENST00000298746 SNCGO76070 127 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 PRSS2P07478 247 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 TRAV2A0A0B4J234 112 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 B5MCH6 92 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 BUB3O43684 328 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 IGHG4P01861 327 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 CFAP126Q5VTH2 177 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
TRUB1-201ENST00000298746 CSPG4Q6UVK1 2322 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 C2CD3Q4AC94 2353 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 IGHV4-39P01824 125 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 VMO1Q7Z5L0 202 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 TEN1Q86WV5 123 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 CNFNQ9BYD5 112 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 DPH3P1Q9H4G8 78 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 ZNF256Q9Y2P7 627 aaPredicted RBP8.76□□□□□ -1.01
TRUB1-201ENST00000298746 IGLV2-18A0A075B6J9 118 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 F8W735 103 aaPredicted RBP8.76□□□□□ -1.01
TRUB1-201ENST00000298746 DUSP14O95147 198 aaKnown RBP8.76□□□□□ -1.01
TRUB1-201ENST00000298746 IGF1P05019 195 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 OR11H6Q8NGC7 330 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 PRO0461Q9UI25 63 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 LAMA5O15230 3695 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 TCL1BO95988 128 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 TP53TG1Q9Y2A0 90 aa8.76□□□□□ -1.01
TRUB1-201ENST00000298746 DMXL1Q9Y485 3027 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 320.3 ms