RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 SHISA9B4DS77 424 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 BAALC-AS2P0C853 105 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 DAD1P61803 113 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 ASPHD1Q5U4P2 390 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 PHF3Q92576 2039 aaKnown RBP8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 ZC2HC1AQ96GY0 325 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 G3V318 75 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 HERVK_113P63121 156 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 PCP2Q8IVA1 136 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 FHL1Q13642 323 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 ZNF747Q9BV97 191 aa8.54□□□□□ -1.04
PKNOX1-201ENST00000291547 C11orf52Q96A22 123 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 IGKV1-39P01597 117 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 IGKV1D-39P04432 117 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 CFHR4Q92496 578 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 FAM110AQ9BQ89 295 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 SPATA25Q9BR10 227 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 PCNX1Q96RV3 2341 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 FOXL2NBQ6ZUU3 175 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 CLPSL1A2RUU4 121 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 NDUFS5O43920 106 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
PKNOX1-201ENST00000291547 A0A0G2JNJ9 132 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 J3KT08 172 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 Q0VFX4 171 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 Q9UFV3 132 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 TMEM14CQ9P0S9 112 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 H3BRN7 92 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 PRB2P02812 416 aaPredicted RBP8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 B3GALT5-AS1P59052 145 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
PKNOX1-201ENST00000291547 MBD3L4A6NDZ8 208 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 MBD3L3A6NE82 208 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 MBD3L5A6NJ08 208 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 MBD3L2Q8NHZ7 208 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 RNF114Q9Y508 228 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 TNCP24821 2201 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 ORMDL1Q9P0S3 153 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 ACYP1P07311 99 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 RUSC1-AS1Q66K80 236 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 ZNF493Q6ZR52 646 aa8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 C1orf147Q96MC9 270 aaPredicted RBP8.51□□□□□ -1.05
PKNOX1-201ENST00000291547 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 RNF183Q96D59 192 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 Q9H8V8 135 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 DYSFO75923 2080 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 MDS2Q8NDY4 140 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 FXYD5Q96DB9 178 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 IGLL5B9A064 214 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 F6UB75 175 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 NDUFC2O95298 119 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 UBE2E1P51965 193 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 GTF3C1Q12789 2109 aa8.5□□□□□ -1.05
PKNOX1-201ENST00000291547 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 A0A1B0GX51 115 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 E7EQL1 145 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 K7EM74 188 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 A0A096LPF7 62 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 CR1LQ2VPA4 569 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 PTPRQQ9UMZ3 2332 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 DEFB105AQ8NG35 78 aa8.49□□□□□ -1.05
PKNOX1-201ENST00000291547 IGKV3D-7A0A0C4DH55 119 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 K7EN84 100 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 NDUFA4O00483 81 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 LINC01619G3V211 115 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 CGB7P0DN87 165 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 IGHG2P01859 326 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 TPSG1Q9NRR2 321 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 LINC01356Q8N9X3 169 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 CENPFP49454 3210 aa8.48□□□□□ -1.05
PKNOX1-201ENST00000291547 CGB3P0DN86 165 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 XCL1P47992 114 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 FOXI1Q12951 378 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 CEP350Q5VT06 3117 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 ATOX1O00244 68 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 ZFP2Q6ZN57 461 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 WFDC9Q8NEX5 89 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 PLXND1Q9Y4D7 1925 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 C10orf142B7Z368 130 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 SRSF2Q01130 221 aaKnown RBP8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 MUC6Q6W4X9 2439 aa8.47□□□□□ -1.05
PKNOX1-201ENST00000291547 LTAP01374 205 aa8.46□□□□□ -1.05
PKNOX1-201ENST00000291547 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.059e-8■□□□□ 9.5
PKNOX1-201ENST00000291547 PRR20EP86478 221 aa8.46□□□□□ -1.05
PKNOX1-201ENST00000291547 PRR20CP86479 221 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms