RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 GP9P14770 177 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 HAMPP81172 84 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 KIAA1549LQ6ZVL6 1849 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 FXYD2P54710 66 aa12.04□□□□□ -0.48
SHROOM4-201ENST00000289292 POU2AF1Q16633 256 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 C22orf46C9J442 243 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 DSCR9P59020 149 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 NDUFA4O00483 81 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 UTF1Q5T230 341 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 BOD1L2Q8IYS8 172 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 HOXB4P17483 251 aaPredicted RBP12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 ZDBF2Q9HCK1 2354 aa12.03□□□□□ -0.48
SHROOM4-201ENST00000289292 C3orf56Q8N813 242 aa12.02□□□□□ -0.48
SHROOM4-201ENST00000289292 MSMBP08118 114 aa12.02□□□□□ -0.48
SHROOM4-201ENST00000289292 TCTEX1D4Q5JR98 221 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 LINC01619G3V211 115 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 FOXI2Q6ZQN5 318 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 SRCAPQ6ZRS2 3230 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 DOCK7Q96N67 2140 aa12.02□□□□□ -0.49
SHROOM4-201ENST00000289292 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
SHROOM4-201ENST00000289292 CFC1P0CG37 223 aa12.01□□□□□ -0.49
SHROOM4-201ENST00000289292 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
SHROOM4-201ENST00000289292 GRNP28799 593 aaKnown RBP12□□□□□ -0.49
SHROOM4-201ENST00000289292 C20orf78Q9BR46 151 aa12□□□□□ -0.49
SHROOM4-201ENST00000289292 APC2O95996 2303 aa12□□□□□ -0.49
SHROOM4-201ENST00000289292 IGHV7-4-1A0A0J9YVY3 117 aa12□□□□□ -0.49
SHROOM4-201ENST00000289292 E7EUB6 86 aa12□□□□□ -0.49
SHROOM4-201ENST00000289292 TP73-AS1Q9UF72 201 aa11.99□□□□□ -0.49
SHROOM4-201ENST00000289292 G3V4G9 280 aa11.99□□□□□ -0.49
SHROOM4-201ENST00000289292 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
SHROOM4-201ENST00000289292 LHBP01229 141 aa11.99□□□□□ -0.49
SHROOM4-201ENST00000289292 I3L2K1 104 aa11.99□□□□□ -0.49
SHROOM4-201ENST00000289292 IGKV1OR2-108A0A075B7D4 117 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 UBL5Q9BZL1 73 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 AKAP6Q13023 2319 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 EML6Q6ZMW3 1958 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 C11orf1Q9H5F2 150 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 SHISA9B4DS77 424 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 CRLF1O75462 422 aa11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
SHROOM4-201ENST00000289292 SUMO4Q6EEV6 95 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 Q6ZSR3 168 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 MRPL36Q9P0J6 103 aaKnown RBP11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 RHODO00212 210 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 PRAC2D3DTV9 90 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 IGHG4P01861 327 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 ODF3L1Q8IXM7 274 aa11.97□□□□□ -0.49
SHROOM4-201ENST00000289292 TRAV25A0A0B4J276 109 aa11.96□□□□□ -0.49
SHROOM4-201ENST00000289292 K7EIM0 57 aa11.96□□□□□ -0.49
SHROOM4-201ENST00000289292 BAALC-AS2P0C853 105 aa11.96□□□□□ -0.49
SHROOM4-201ENST00000289292 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.49
SHROOM4-201ENST00000289292 ZNF106Q9H2Y7 1883 aaKnown RBP11.96□□□□□ -0.5
SHROOM4-201ENST00000289292 F5H768 121 aa11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 MRPL53Q96EL3 112 aaKnown RBP11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 DEFB1P60022 68 aa11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 MUSTN1Q8IVN3 82 aa11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 Q9H8V8 135 aa11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
SHROOM4-201ENST00000289292 DAND5Q8N907 189 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 CR1LQ2VPA4 569 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 Q6ZPA2 131 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 IGLV2-23P01705 113 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 F8WEM9 126 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 UBE2DNLQ8IWF7 75 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 RNF138Q8WVD3 245 aa11.94□□□□□ -0.5
SHROOM4-201ENST00000289292 K7ENP7 123 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 FOXI1Q12951 378 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 HERVK_113P63121 156 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 PRSS47A8MTI9 375 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 ALPK3Q96L96 1907 aa11.93□□□□□ -0.5
SHROOM4-201ENST00000289292 PTH2Q96A98 100 aa11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 TRAV13-2A0A0B4J235 113 aa11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 APRG1Q8IVJ8 170 aa11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 RBAKDNA6NC62 111 aa11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 IGKV3D-7A0A0C4DH55 119 aa11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
SHROOM4-201ENST00000289292 FAM236AA0A1B0GUQ0 79 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 FAM236BA0A1B0GV22 79 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 A4D1N5 150 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 XCL1P47992 114 aa11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 RBM3P98179 157 aaKnown RBP11.91□□□□□ -0.5
SHROOM4-201ENST00000289292 DSCR8Q96T75 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms