RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HOXA5P20719 270 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 TCL1AP56279 114 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 GOLT1AQ6ZVE7 132 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 EIF4E3Q8N5X7 224 aaKnown RBP6.41□□□□□ -1.38
HMGN1-201ENST00000288344 HYLS1Q96M11 299 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 GSN-AS1Q9NRJ2 163 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 MDFICQ9P1T7 246 aa6.41□□□□□ -1.38
HMGN1-201ENST00000288344 TRAV1-1A0A0B4J248 108 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 HTN1P15515 57 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 CRIP1P50238 77 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 FGF8P55075 233 aaPredicted RBP6.4□□□□□ -1.39
HMGN1-201ENST00000288344 DAD1P61803 113 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 CCL20P78556 96 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 FAM74A1Q5RGS3 127 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 AKR1C8PQ5T2L2 129 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 Q6ZTI0 123 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 C9orf62Q8N4C0 152 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 POM121L12Q8N7R1 296 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 SGK494Q96LW2 274 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 PSG8Q9UQ74 426 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 ARL2-SNX15V9GYD0 113 aa6.4□□□□□ -1.39
HMGN1-201ENST00000288344 TRBV6-1A0A0K0K1D8 114 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 MAP1LC3B2A6NCE7 125 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 LY6G6CO95867 125 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 DEFB130BP0DP73 79 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 DEFB130AP0DP74 79 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 RNF151Q2KHN1 245 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 LGALS9BQ3B8N2 356 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 TMEM88Q6PEY1 159 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 DPPA3Q6W0C5 159 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 CYB561D1Q8N8Q1 229 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 TMEM75Q8N9X5 138 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 ZNF680Q8NEM1 530 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 CMTM2Q8TAZ6 248 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 RASL10AQ92737 203 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 C8orf49Q96NF6 230 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 ATG101Q9BSB4 218 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 ZNF471Q9BX82 626 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-201ENST00000288344 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
HMGN1-201ENST00000288344 MAP1LC3BQ9GZQ8 125 aa6.39□□□□□ -1.39
HMGN1-201ENST00000288344 IGHV3-16A0A0C4DH30 117 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 KANTRA0A1W2PQU2 76 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 FBLL1A6NHQ2 334 aaKnown RBP6.38□□□□□ -1.39
HMGN1-201ENST00000288344 C9orf118A6NHY6 69 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 GNRH2O43555 120 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 ATP5G1P05496 136 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 GYPEP15421 78 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 ATP5G3P48201 142 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 SULT1A2P50226 295 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 FLI1Q01543 452 aaPredicted RBP6.38□□□□□ -1.39
HMGN1-201ENST00000288344 HIST1H2BAQ96A08 127 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 NDUFAF3Q9BU61 184 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 TREM1Q9NP99 234 aa6.38□□□□□ -1.39
HMGN1-201ENST00000288344 TRAV34A0A0B4J273 112 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 IGKV3D-20A0A0C4DH25 116 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 H3BNG1 76 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 PEX7O00628 323 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 TPT1P13693 172 aaKnown RBP6.37□□□□□ -1.39
HMGN1-201ENST00000288344 UBE2G2P60604 165 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE13Q4V321 117 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 MUC21Q5SSG8 566 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 IQCF2Q8IXL9 164 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 SFT2D1Q8WV19 159 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
HMGN1-201ENST00000288344 TRAV21A0A0B4J279 112 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE12BA1L429 117 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 F6UZH7 168 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 PAGE4O60829 102 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE7O76087 117 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 TYMSP04818 313 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 PFN1P07737 140 aaKnown RBP6.36□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE12FP0CL80 117 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE12GP0CL81 117 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 GAGE12IP0CL82 117 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 RNASE3P12724 160 aaKnown RBP6.36□□□□□ -1.39
HMGN1-201ENST00000288344 EIF5AP63241 154 aaKnown RBP6.36□□□□□ -1.39
HMGN1-201ENST00000288344 FHL2Q14192 279 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 RNF212Q495C1 297 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 SAPCD1Q5SSQ6 148 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 DNLZQ5SXM8 178 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 Q6ZR54 194 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 SLC51BQ86UW2 128 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 LYPD6BQ8NI32 183 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 PTH2Q96A98 100 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 C9orf85Q96MD7 179 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 TCEAL7Q9BRU2 100 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 DNAH5Q8TE73 4624 aa6.36□□□□□ -1.39
HMGN1-201ENST00000288344 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 LTAP01374 205 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 RAB5CP51148 216 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 LINC00310P59036 64 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 TMEM183BQ1AE95 376 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 PRNTQ86SH4 94 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 AKAP14Q86UN6 197 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 FAM213BQ8TBF2 198 aa6.35□□□□□ -1.39
HMGN1-201ENST00000288344 SPXQ9BT56 116 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms