RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADAMTS9Q9P2N4 1935 aa14.53□□□□□ -0.08
PCDH1-201ENST00000287008 ZNF114Q8NC26 417 aa14.52□□□□□ -0.08
PCDH1-201ENST00000287008 HLA-DRB4P13762 266 aa14.52□□□□□ -0.08
PCDH1-201ENST00000287008 MRPL51Q4U2R6 128 aaKnown RBP14.52□□□□□ -0.08
PCDH1-201ENST00000287008 HLA-DRB4X5D2U9 266 aa14.52□□□□□ -0.08
PCDH1-201ENST00000287008 CEP295Q9C0D2 2601 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 A0A096LPF7 62 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 ANGP03950 147 aaKnown RBP14.52□□□□□ -0.09
PCDH1-201ENST00000287008 C18orf32Q8TCD1 76 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 NOP10Q9NPE3 64 aaKnown RBP14.52□□□□□ -0.09
PCDH1-201ENST00000287008 K7EIM0 57 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 IGLV1-47P01700 117 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 PMVKQ15126 192 aa14.52□□□□□ -0.09
PCDH1-201ENST00000287008 IGLV11-55A0A075B6I3 123 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 ESDP10768 282 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 C17orf77Q96MU5 243 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 VWC2LB2RUY7 222 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 IGKV1-17P01599 117 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 ADCYAP1P18509 176 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 C5orf56Q8N8D9 126 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 DYNAPQ8N1N2 210 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 ZNF462Q96JM2 2506 aa14.51□□□□□ -0.09
PCDH1-201ENST00000287008 CGB3P0DN86 165 aa14.5□□□□□ -0.09
PCDH1-201ENST00000287008 Q0VG73 95 aa14.5□□□□□ -0.09
PCDH1-201ENST00000287008 SAMD5Q5TGI4 173 aa14.5□□□□□ -0.09
PCDH1-201ENST00000287008 SMIM2Q9BVW6 85 aa14.5□□□□□ -0.09
PCDH1-201ENST00000287008 U3KQE9 123 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 PFN2P35080 140 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 IL15RAQ13261 267 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 MSMPQ1L6U9 139 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 ZNF493Q6ZR52 646 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 APRG1Q8IVJ8 170 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 WIPF2Q8TF74 440 aaPredicted RBP14.49□□□□□ -0.09
PCDH1-201ENST00000287008 V9GYV3 84 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 TRAV26-2A0A0B4J265 109 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 CLPSL1A2RUU4 121 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 CTSGP08311 255 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 Q8N7P7 452 aa14.49□□□□□ -0.09
PCDH1-201ENST00000287008 I3L2K1 104 aa14.48□□□□□ -0.09
PCDH1-201ENST00000287008 CDK2AP2O75956 126 aa14.48□□□□□ -0.09
PCDH1-201ENST00000287008 NEGR1Q7Z3B1 354 aa14.48□□□□□ -0.09
PCDH1-201ENST00000287008 A0A0J9YY99 117 aa14.48□□□□□ -0.09
PCDH1-201ENST00000287008 LOXL1Q08397 574 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-201ENST00000287008 CGB7P0DN87 165 aa14.47□□□□□ -0.09
PCDH1-201ENST00000287008 NKAPP1Q8N9T2 125 aa14.47□□□□□ -0.09
PCDH1-201ENST00000287008 DLX4Q92988 240 aaPredicted RBP14.47□□□□□ -0.09
PCDH1-201ENST00000287008 MEGF9Q9H1U4 602 aa14.47□□□□□ -0.09
PCDH1-201ENST00000287008 A0A087X0K7 114 aa14.46□□□□□ -0.09
PCDH1-201ENST00000287008 MYCNOSP40205 109 aa14.46□□□□□ -0.09
PCDH1-201ENST00000287008 DSCAMO60469 2012 aa14.46□□□□□ -0.1
PCDH1-201ENST00000287008 RBAKDNA6NC62 111 aa14.46□□□□□ -0.1
PCDH1-201ENST00000287008 STPG4Q8N801 248 aa14.46□□□□□ -0.1
PCDH1-201ENST00000287008 OVOL2Q9BRP0 275 aa14.46□□□□□ -0.1
PCDH1-201ENST00000287008 USP9XQ93008 2570 aaPredicted RBP14.46□□□□□ -0.1
PCDH1-201ENST00000287008 IGHV1-24A0A0C4DH33 117 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 GNRH2O43555 120 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 IGHG2P01859 326 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 KLF5Q13887 457 aaPredicted RBP14.45□□□□□ -0.1
PCDH1-201ENST00000287008 C21orf62-AS1Q17RA5 79 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 RITA1Q96K30 269 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 SPART-AS1P0CW21 52 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 MTURNQ8N3F0 131 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 SIRPDQ9H106 197 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 ABCA12Q86UK0 2595 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 IGHV4OR15-8A0A075B7B6 117 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 A0A087WW49 117 aa14.45□□□□□ -0.1
PCDH1-201ENST00000287008 LURAP1LQ8IV03 231 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 TEX48A0A1B0GUV7 120 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 LOC105371267A0A1B0GV96 52 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 RNF152Q8N8N0 203 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 C20orf78Q9BR46 151 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 NAA38Q9BRA0 125 aaKnown RBP14.44□□□□□ -0.1
PCDH1-201ENST00000287008 PCDH15Q96QU1 1955 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 LTBP2Q14767 1821 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 BUB3O43684 328 aa14.44□□□□□ -0.1
PCDH1-201ENST00000287008 NXPH4O95158 308 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 CHD3Q12873 2000 aaKnown RBP14.43□□□□□ -0.1
PCDH1-201ENST00000287008 NPYP01303 97 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 MPV17L2Q567V2 206 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 LYPD6Q86Y78 171 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 SMIM27A0A1W2PRY6 76 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 TMEM89A2RUT3 159 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 LTAP01374 205 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 IGLV2-23P01705 113 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 KLF12Q9Y4X4 402 aa14.43□□□□□ -0.1
PCDH1-201ENST00000287008 ATP5G1P05496 136 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 LMO4P61968 165 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 DNAJC30Q96LL9 226 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 LRRK2Q5S007 2527 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 C2orf70A6NJV1 201 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 LRRC75A-AS1Q8N1F1 130 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 C19orf84I3L1E1 186 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 IGKV2D-24A0A075B6R9 120 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 K7EMT4 169 aa14.42□□□□□ -0.1
PCDH1-201ENST00000287008 EGR2P11161 476 aaPredicted RBP14.42□□□□□ -0.1
PCDH1-201ENST00000287008 A0A1B0GV72 72 aa14.41□□□□□ -0.1
PCDH1-201ENST00000287008 C16orf54Q6UWD8 224 aa14.41□□□□□ -0.1
PCDH1-201ENST00000287008 FASNP49327 2511 aaKnown RBP14.41□□□□□ -0.1
PCDH1-201ENST00000287008 NDUFA12Q9UI09 145 aa14.41□□□□□ -0.1
PCDH1-201ENST00000287008 PYY3Q5JQD4 70 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms