RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NIPBLQ6KC79 2804 aaeCLIP13.52□□□□□ -0.24
CAPN1-201ENST00000279247 ELANEP08246 267 aa13.52□□□□□ -0.24
CAPN1-201ENST00000279247 SPANXN1Q5VSR9 72 aa13.52□□□□□ -0.24
CAPN1-201ENST00000279247 FA2HQ7L5A8 372 aa13.52□□□□□ -0.24
CAPN1-201ENST00000279247 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.24
CAPN1-201ENST00000279247 M0R381 172 aa13.52□□□□□ -0.25
CAPN1-201ENST00000279247 OVOL1O14753 267 aa13.52□□□□□ -0.25
CAPN1-201ENST00000279247 S100A4P26447 101 aaKnown RBP13.52□□□□□ -0.25
CAPN1-201ENST00000279247 DNLZQ5SXM8 178 aa13.52□□□□□ -0.25
CAPN1-201ENST00000279247 PMCHL2Q9BQD1 86 aa13.52□□□□□ -0.25
CAPN1-201ENST00000279247 JMJD1CQ15652 2540 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 LEPROTL1O95214 131 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 Q8N976 141 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 OR11H1Q8NG94 326 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 A0A1B0GW15 77 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 LINC00477Q96M19 166 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 PPP1R14DQ9NXH3 145 aa13.51□□□□□ -0.25
CAPN1-201ENST00000279247 TRAV26-2A0A0B4J265 109 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 DNAJC9-AS1A6NH13 148 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 NPYP01303 97 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 DCANP1Q8TF63 244 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 C14orf144Q96I85 54 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 KRTAP1-1Q07627 177 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 TRAV12-2A0A075B6T6 113 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 K7EMT4 169 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 GNRH2O43555 120 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 ANXA2RQ3ZCQ2 193 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 ZNF493Q6ZR52 646 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 SPATA12Q7Z6I5 190 aa13.5□□□□□ -0.25
CAPN1-201ENST00000279247 FN1P02751 2386 aaKnown RBP13.49□□□□□ -0.25
CAPN1-201ENST00000279247 ID1P41134 155 aa13.49□□□□□ -0.25
CAPN1-201ENST00000279247 ZNF705AQ6ZN79 300 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-201ENST00000279247 KLHL30-AS1Q8NEE0 82 aa13.49□□□□□ -0.25
CAPN1-201ENST00000279247 DPF1Q92782 380 aa13.49□□□□□ -0.25
CAPN1-201ENST00000279247 ESM1Q9NQ30 184 aa13.49□□□□□ -0.25
CAPN1-201ENST00000279247 ZNF580Q9UK33 172 aa13.49□□□□□ -0.25
CAPN1-201ENST00000279247 TCTEX1D4Q5JR98 221 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 TEX43Q6ZNM6 134 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 SIGLEC8Q9NYZ4 499 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 TRAV12-3A0A0B4J271 114 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 C2orf70A6NJV1 201 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 BTF3P20290 206 aaKnown RBP13.48□□□□□ -0.25
CAPN1-201ENST00000279247 Q6ZSV7 163 aa13.48□□□□□ -0.25
CAPN1-201ENST00000279247 CHCHD1Q96BP2 118 aaKnown RBP13.48□□□□□ -0.25
CAPN1-201ENST00000279247 RAB4AP20338 218 aa13.47□□□□□ -0.25
CAPN1-201ENST00000279247 FOXC2Q99958 501 aa13.47□□□□□ -0.25
CAPN1-201ENST00000279247 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
CAPN1-201ENST00000279247 TRAV21A0A0B4J279 112 aa13.47□□□□□ -0.25
CAPN1-201ENST00000279247 SRSF2Q01130 221 aaKnown RBP13.47□□□□□ -0.25
CAPN1-201ENST00000279247 SPATA45Q537H7 98 aa13.46□□□□□ -0.25
CAPN1-201ENST00000279247 TMEM191AQ9H0A3 160 aa13.46□□□□□ -0.25
CAPN1-201ENST00000279247 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
CAPN1-201ENST00000279247 RNF185Q96GF1 192 aa13.46□□□□□ -0.26
CAPN1-201ENST00000279247 TMEM70Q9BUB7 260 aa13.46□□□□□ -0.26
CAPN1-201ENST00000279247 TMEM89A2RUT3 159 aa13.45□□□□□ -0.26
CAPN1-201ENST00000279247 SNRPD3P62318 126 aaKnown RBP13.45□□□□□ -0.26
CAPN1-201ENST00000279247 HTN1P15515 57 aa13.45□□□□□ -0.26
CAPN1-201ENST00000279247 ZNF124Q15973 351 aa13.45□□□□□ -0.26
CAPN1-201ENST00000279247 PHLDA3Q9Y5J5 127 aa13.45□□□□□ -0.26
CAPN1-201ENST00000279247 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
CAPN1-201ENST00000279247 SPINK13Q1W4C9 94 aa13.44□□□□□ -0.26
CAPN1-201ENST00000279247 ADAMTSL5Q6ZMM2 481 aa13.44□□□□□ -0.26
CAPN1-201ENST00000279247 GATD1Q8NB37 220 aa13.44□□□□□ -0.26
CAPN1-201ENST00000279247 MYOZ3Q8TDC0 251 aa13.44□□□□□ -0.26
CAPN1-201ENST00000279247 TCTAP57738 103 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 SMIM15Q7Z3B0 74 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 DEFB104AQ8WTQ1 72 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 KIR2DL5BA0A0G2JN68 375 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 KIR2DL5BA0A0G2JPC4 375 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 REC114Q7Z4M0 266 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 KIR2DL5AQ8N109 375 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 DLX4Q92988 240 aaPredicted RBP13.43□□□□□ -0.26
CAPN1-201ENST00000279247 NDUFAF3Q9BU61 184 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 MUC4Q99102 2169 aa13.43□□□□□ -0.26
CAPN1-201ENST00000279247 ASIPP42127 132 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 LENEPQ9Y5L5 61 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 LINC01619G3V211 115 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 C14orf178Q8N769 122 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-201ENST00000279247 C18orf15Q96N68 181 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 SYS1-DBNDD2H3BUS1 97 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 CNFNQ9BYD5 112 aa13.42□□□□□ -0.26
CAPN1-201ENST00000279247 K7EQG2 157 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 TNFRSF6BO95407 300 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 MGPP08493 103 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 CD7P09564 240 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 FAM159AQ6UWV7 190 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 BATFQ16520 125 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 MAP1LC3CQ9BXW4 147 aa13.41□□□□□ -0.26
CAPN1-201ENST00000279247 NSD1Q96L73 2696 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-201ENST00000279247 TCF21O43680 179 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 F8P00451 2351 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
CAPN1-201ENST00000279247 DEFB131AP59861 70 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms