RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NAA38Q9BRA0 125 aaKnown RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 HDHD3Q9BSH5 251 aaPredicted RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 TSSK6Q9BXA6 273 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 TMEM191AQ9H0A3 160 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 IER3IP1Q9Y5U9 82 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 ZFHX3Q15911 3703 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 DSCAMO60469 2012 aa3.17□□□□□ -1.9
CD44-202ENST00000278385 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
CD44-202ENST00000278385 AKAP6Q13023 2319 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 USF3Q68DE3 2245 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 HIVEP1P15822 2718 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 IGHV1-58A0A0C4DH39 117 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 A8MWL6 223 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 A8MWP6 167 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 I3L521 148 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 ZNF324O75467 553 aaPredicted RBP3.16□□□□□ -1.9
CD44-202ENST00000278385 MSMBP08118 114 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
CD44-202ENST00000278385 ELK1P19419 428 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 SRP14P37108 136 aaKnown RBP3.16□□□□□ -1.9
CD44-202ENST00000278385 TAS2R45P59539 299 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 CCL8P80075 99 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 RHOGP84095 191 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 RNASE13Q5GAN3 156 aaKnown RBP3.16□□□□□ -1.9
CD44-202ENST00000278385 FAAP20Q6NZ36 180 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 ZNF101Q8IZC7 436 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 DEFB107AQ8IZN7 70 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 C10orf126Q8N4M7 172 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 C11orf42Q8N5U0 333 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 CLDND2Q8NHS1 167 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 LITAFQ99732 161 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 RERGLQ9H628 205 aa3.16□□□□□ -1.9
CD44-202ENST00000278385 KLK5Q9Y337 293 aaPredicted RBP3.16□□□□□ -1.9
CD44-202ENST00000278385 VPS13CQ709C8 3753 aa3.15□□□□□ -1.9
CD44-202ENST00000278385 FREM1Q5H8C1 2179 aa3.15□□□□□ -1.9
CD44-202ENST00000278385 ODAMA1E959 279 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 BUB1B-PAK6H3BSN5 160 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 RER1O15258 196 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 CST7O76096 145 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 IGHV1-46P01743 117 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 PRM2P04554 102 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 ZNF688P0C7X2 276 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 FABP2P12104 132 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 MPV17P39210 176 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 CMC4P56277 68 aaPredicted RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 FXYD6P3P58550 94 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 MEF2BQ02080 365 aaPredicted RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 COL5A1-AS1Q5SY13 56 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 AADACL3Q5VUY0 350 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 LINC00305Q7Z4B0 112 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 Q8N377 158 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 BRK1Q8WUW1 75 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 C1orf147Q96MC9 270 aaPredicted RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 SHANK2-AS3Q9BTD1 123 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 DERL1Q9BUN8 251 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 FUT9Q9Y231 359 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 NOP16Q9Y3C1 178 aaKnown RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 ARID1AO14497 2285 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 CENPEQ02224 2701 aa3.15□□□□□ -1.91
CD44-202ENST00000278385 ANKRD17O75179 2603 aaKnown RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 ANK3Q12955 4377 aaKnown RBP3.15□□□□□ -1.91
CD44-202ENST00000278385 LRBAP50851 2863 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 HIVEP2P31629 2446 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 DCHS2Q6V1P9 2916 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 C2CD3Q4AC94 2353 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 IGHV3-43A0A0B4J1X8 118 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 A0A1B0GVX0 72 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 IQCF6A8MYZ5 107 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 C1orf196B1AJZ1 125 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 TMEM256-PLSCR3K7ERE1 68 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 BPY2O14599 106 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 SNAPC5O75971 98 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 NAPSAO96009 420 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 HIST1H1DP16402 221 aaKnown RBP3.14□□□□□ -1.91
CD44-202ENST00000278385 UBE2AP49459 152 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 FOXA3P55318 350 aaPredicted RBP3.14□□□□□ -1.91
CD44-202ENST00000278385 GNB2P62879 340 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 LGALS9BQ3B8N2 356 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 TMEM155Q4W5P6 130 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 HSD17B12Q53GQ0 312 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 OR2T2Q6IF00 324 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 GTF2H5Q6ZYL4 71 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 TRAPPC6BQ86SZ2 158 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 TMEM256Q8N2U0 113 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 PACRGLQ8N7B6 248 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 DAND5Q8N907 189 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 OR5D14Q8NGL3 314 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 OR10AC1Q8NH08 325 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 DEDD2Q8WXF8 326 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 SPTSSAQ969W0 71 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 SLC25A46Q96AG3 418 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 LINC00479Q96M42 142 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 CHCHD7Q9BUK0 85 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 BANF2Q9H503 90 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 RPP21Q9H633 154 aaKnown RBP3.14□□□□□ -1.91
CD44-202ENST00000278385 TMEM106BQ9NUM4 274 aa3.14□□□□□ -1.91
CD44-202ENST00000278385 IL36BQ9NZH7 164 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms