RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 SPXQ9BT56 116 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 CTSGP08311 255 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 ODF3L1Q8IXM7 274 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 STPG4Q8N801 248 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 TIMM21Q9BVV7 248 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE12JA6NER3 117 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE1Q13065 139 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE4Q13068 117 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE5Q13069 117 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE13Q4V321 117 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 SAMD5Q5TGI4 173 aa12.06□□□□□ -0.48
TIMP3-201ENST00000266085 K7EN84 100 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 IGLV2-14P01704 120 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 AZU1P20160 251 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 KMT2EQ8IZD2 1858 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 PAX4O43316 350 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 CFHR3Q02985 330 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 C11orf68Q9H3H3 251 aaKnown RBP12.05□□□□□ -0.48
TIMP3-201ENST00000266085 PRIMA1Q86XR5 153 aa12.05□□□□□ -0.48
TIMP3-201ENST00000266085 MRPL53Q96EL3 112 aaKnown RBP12.04□□□□□ -0.48
TIMP3-201ENST00000266085 PRRC2AP48634 2157 aaKnown RBP12.04□□□□□ -0.48
TIMP3-201ENST00000266085 PATE2Q6UY27 113 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 MYMXA0A1B0GTQ4 84 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE12BA1L429 117 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 I3L3M4 83 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE7O76087 117 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE12FP0CL80 117 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE12GP0CL81 117 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GAGE12IP0CL82 117 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 UBE2DNLQ8IWF7 75 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 AJUBAQ96IF1 538 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 CCL24O00175 119 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 GP9P14770 177 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 DAD1P61803 113 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 C5orf56Q8N8D9 126 aa12.04□□□□□ -0.48
TIMP3-201ENST00000266085 NPC2P61916 151 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 NAA38Q9BRA0 125 aaKnown RBP12.03□□□□□ -0.48
TIMP3-201ENST00000266085 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 ARHGAP21Q5T5U3 1957 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 E7EUB6 86 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 SIRPDQ9H106 197 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 JPT2Q9H910 190 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 F5H768 121 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 PROP1O75360 226 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 NPYP01303 97 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 FOXE3Q13461 319 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 SIGLEC8Q9NYZ4 499 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 TSSC4Q9Y5U2 329 aaPredicted RBP12.03□□□□□ -0.48
TIMP3-201ENST00000266085 ESDP10768 282 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 LMO4P61968 165 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 SS18Q15532 418 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
TIMP3-201ENST00000266085 INS-IGF2F8WCM5 200 aa12.02□□□□□ -0.48
TIMP3-201ENST00000266085 IGLV2-23P01705 113 aa12.02□□□□□ -0.48
TIMP3-201ENST00000266085 CGB3P0DN86 165 aa12.02□□□□□ -0.48
TIMP3-201ENST00000266085 CGB7P0DN87 165 aa12.02□□□□□ -0.48
TIMP3-201ENST00000266085 EGR2P11161 476 aaPredicted RBP12.02□□□□□ -0.48
TIMP3-201ENST00000266085 MEGF9Q9H1U4 602 aa12.02□□□□□ -0.48
TIMP3-201ENST00000266085 TRAV8-2A0A0B4J237 113 aa12.02□□□□□ -0.49
TIMP3-201ENST00000266085 RBAKDNA6NC62 111 aa12.02□□□□□ -0.49
TIMP3-201ENST00000266085 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
TIMP3-201ENST00000266085 TSPAN13O95857 204 aa12.02□□□□□ -0.49
TIMP3-201ENST00000266085 C20orf144Q9BQM9 153 aa12.02□□□□□ -0.49
TIMP3-201ENST00000266085 FN1P02751 2386 aaKnown RBP12.02□□□□□ -0.49
TIMP3-201ENST00000266085 CEP350Q5VT06 3117 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 BUB3O43684 328 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 ALPK3Q96L96 1907 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 PMVKQ15126 192 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 CRIP3Q6Q6R5 217 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 TMEM141Q96I45 108 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 POLR3KQ9Y2Y1 108 aaPredicted RBP12.01□□□□□ -0.49
TIMP3-201ENST00000266085 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 TEX22C9J3V5 150 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 CRYGCP07315 174 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 Q6ZPA2 131 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 IGKV1OR2-108A0A075B7D4 117 aa12.01□□□□□ -0.49
TIMP3-201ENST00000266085 IGHV1-24A0A0C4DH33 117 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 SLURP1P55000 103 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 APOC4P55056 127 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 UTF1Q5T230 341 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 Q6ZWC4 215 aa12□□□□□ -0.49
TIMP3-201ENST00000266085 SRSF2Q01130 221 aaKnown RBP11.99□□□□□ -0.49
TIMP3-201ENST00000266085 MRPL36Q9P0J6 103 aaKnown RBP11.99□□□□□ -0.49
TIMP3-201ENST00000266085 TNRC6AQ8NDV7 1962 aaKnown RBP11.99□□□□□ -0.49
TIMP3-201ENST00000266085 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
TIMP3-201ENST00000266085 NEGR1Q7Z3B1 354 aa11.99□□□□□ -0.49
TIMP3-201ENST00000266085 EPG5Q9HCE0 2579 aa11.99□□□□□ -0.49
TIMP3-201ENST00000266085 CST9LQ9H4G1 147 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 ATXN8Q156A1 80 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 SPAG8Q99932 426 aaPredicted RBP11.98□□□□□ -0.49
TIMP3-201ENST00000266085 C20orf78Q9BR46 151 aa11.98□□□□□ -0.49
TIMP3-201ENST00000266085 GNRH2O43555 120 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms