RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 IGLV1-47P01700 117 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 PRTN3P24158 256 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 CCL17Q92583 94 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 PRR25Q96S07 402 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
NUP54-201ENST00000264883 TRAV8-2A0A0B4J237 113 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 CENPVL3A0A0U1RRI6 287 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 TGFAP01135 160 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
NUP54-201ENST00000264883 ZNF80P51504 273 aaPredicted RBP10.16□□□□□ -0.78
NUP54-201ENST00000264883 EFNA4P52798 201 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 GFRALQ6UXV0 394 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 SCGB1D4Q6XE38 83 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
NUP54-201ENST00000264883 IGHV3-72A0A0B4J1Y9 119 aa10.15□□□□□ -0.78
NUP54-201ENST00000264883 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
NUP54-201ENST00000264883 ORM1P02763 201 aa10.15□□□□□ -0.78
NUP54-201ENST00000264883 DTX2Q86UW9 622 aa10.15□□□□□ -0.78
NUP54-201ENST00000264883 RNF125Q96EQ8 232 aa10.15□□□□□ -0.78
NUP54-201ENST00000264883 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
NUP54-201ENST00000264883 TRAV12-1A0A0B4J245 112 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 ZNF815PA8K554 130 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 BUB1B-PAK6H3BSN5 160 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 CRLF1O75462 422 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 SCGB1C2P0DMR2 95 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 SRSF2Q01130 221 aaKnown RBP10.15□□□□□ -0.79
NUP54-201ENST00000264883 ZNF575Q86XF7 245 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 ITPR1Q14643 2758 aa10.15□□□□□ -0.79
NUP54-201ENST00000264883 CD7P09564 240 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 FAM159AQ6UWV7 190 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 C22orf34Q6ZV56 151 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 ATRXP46100 2492 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 A0A0G2JNJ9 132 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 CNTFRP26992 372 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 Q6Q795 121 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 ZNF491Q8N8L2 437 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 Q8TAT8 98 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 PLEKHB2Q96CS7 222 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 Q9UFV3 132 aa10.14□□□□□ -0.79
NUP54-201ENST00000264883 K7EIM0 57 aa10.13□□□□□ -0.79
NUP54-201ENST00000264883 BSPH1Q075Z2 132 aa10.13□□□□□ -0.79
NUP54-201ENST00000264883 RNASE6Q93091 150 aaKnown RBP10.13□□□□□ -0.79
NUP54-201ENST00000264883 SPANXA1Q9NS26 97 aa10.13□□□□□ -0.79
NUP54-201ENST00000264883 POLEQ07864 2286 aa10.13□□□□□ -0.79
NUP54-201ENST00000264883 SLC25A20O43772 301 aa10.12□□□□□ -0.79
NUP54-201ENST00000264883 VKORC1Q9BQB6 163 aa10.12□□□□□ -0.79
NUP54-201ENST00000264883 DYNLRB1Q9NP97 96 aa10.12□□□□□ -0.79
NUP54-201ENST00000264883 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
NUP54-201ENST00000264883 SLC25A16P16260 332 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 KLRB1Q12918 225 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 MEIG1Q5JSS6 88 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 NRACQ8N912 160 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 ONECUT1Q9UBC0 465 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 PCNX1Q96RV3 2341 aa10.11□□□□□ -0.79
NUP54-201ENST00000264883 C9JAW5 83 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 YAE1D1Q9NRH1 226 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 M0QXV9 152 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 TRGV3P03979 118 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
NUP54-201ENST00000264883 PSMG3-AS1Q96PY0 264 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
NUP54-201ENST00000264883 CADP27708 2225 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 LY6LH3BQJ8 138 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 Q6ZQT7 251 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 NEXN-AS1Q8NBZ9 246 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 KLK15Q9H2R5 256 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 CFC1BP0CG36 223 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 CFC1P0CG37 223 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 COX6B1P14854 86 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 MFAP4P55083 255 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 PKD1L2Q7Z442 2459 aa10.09□□□□□ -0.79
NUP54-201ENST00000264883 OR10J6PQ8NGY7 276 aa10.08□□□□□ -0.8
NUP54-201ENST00000264883 NBR2O15453 112 aa10.08□□□□□ -0.8
NUP54-201ENST00000264883 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
NUP54-201ENST00000264883 KLHL30-AS1Q8NEE0 82 aa10.08□□□□□ -0.8
NUP54-201ENST00000264883 NPBQ8NG41 125 aa10.08□□□□□ -0.8
NUP54-201ENST00000264883 ID1P41134 155 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 CRIP2P52943 208 aaPredicted RBP10.07□□□□□ -0.8
NUP54-201ENST00000264883 Q8N1Y9 231 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 C15orf53Q8NAA6 179 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 NTN5Q8WTR8 489 aaPredicted RBP10.07□□□□□ -0.8
NUP54-201ENST00000264883 PRO1854Q9UHT4 67 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 B9A039 149 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 IGHG4P01861 327 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
NUP54-201ENST00000264883 RASL10AQ92737 203 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 ODF3Q96PU9 254 aa10.07□□□□□ -0.8
NUP54-201ENST00000264883 ABCA1O95477 2261 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 A0A0J9YY99 117 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 MDFICQ9P1T7 246 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 TPRP12270 2363 aaKnown RBP10.06□□□□□ -0.8
NUP54-201ENST00000264883 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms