RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 TRAV40A0A0B4J280 105 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 SLC25A20O43772 301 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 ZNF883P0CG24 379 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 PRO3102Q9H379 93 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
SCARF1-201ENST00000263071 TCL1BO95988 128 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 GFRALQ6UXV0 394 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 TIMD4Q96H15 378 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 NDUFA7O95182 113 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 GATD1Q8NB37 220 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 PIFOQ8TCI5 191 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 PRSS22Q9GZN4 317 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 CKS2P33552 79 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 OR11H6Q8NGC7 330 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
SCARF1-201ENST00000263071 C7orf69Q9H7B7 122 aa11.1□□□□□ -0.63
SCARF1-201ENST00000263071 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
SCARF1-201ENST00000263071 NPYP01303 97 aa11.09□□□□□ -0.63
SCARF1-201ENST00000263071 DCHS2Q6V1P9 2916 aa11.09□□□□□ -0.63
SCARF1-201ENST00000263071 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
SCARF1-201ENST00000263071 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
SCARF1-201ENST00000263071 ZNF292O60281 2723 aa11.09□□□□□ -0.63
SCARF1-201ENST00000263071 IGKV2-40A0A087WW87 121 aaPredicted RBP11.09□□□□□ -0.63
SCARF1-201ENST00000263071 IGKV2D-40P01614 121 aaPredicted RBP11.09□□□□□ -0.63
SCARF1-201ENST00000263071 LEPP41159 167 aa11.09□□□□□ -0.63
SCARF1-201ENST00000263071 CD7P09564 240 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 ZNF56Q15929 161 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 TMEM167AQ8TBQ9 72 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
SCARF1-201ENST00000263071 SORL1Q92673 2214 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 SHISA9B4DS77 424 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 ORM1P02763 201 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 ZNF833PQ6ZTB9 187 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 ZNF492Q9P255 531 aa11.08□□□□□ -0.64
SCARF1-201ENST00000263071 IGKV3-7A0A075B6H7 116 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 PTPRBP23467 1997 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 IGLV3-9A0A075B6K5 115 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
SCARF1-201ENST00000263071 MBD3L3A6NE82 208 aaPredicted RBP11.07□□□□□ -0.64
SCARF1-201ENST00000263071 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
SCARF1-201ENST00000263071 NDUFA3O95167 84 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 MBD3L2Q8NHZ7 208 aaPredicted RBP11.07□□□□□ -0.64
SCARF1-201ENST00000263071 TRGV9Q99603 122 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 HLA-DRB4X5D2U9 266 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 A0A0G2JNJ9 132 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 TMEM178BH3BS89 294 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 TM4SF5O14894 197 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 SPRY2O43597 315 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 IGHV1-8P0DP01 117 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
SCARF1-201ENST00000263071 Q9UFV3 132 aa11.07□□□□□ -0.64
SCARF1-201ENST00000263071 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 C19orf71A6NCJ1 209 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 LOXP28300 417 aaPredicted RBP11.06□□□□□ -0.64
SCARF1-201ENST00000263071 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 Q8N1Y9 231 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 FMC1Q96HJ9 113 aa11.06□□□□□ -0.64
SCARF1-201ENST00000263071 ATP5LO75964 103 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 PMVKQ15126 192 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 Q86TA4 180 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 SETD2Q9BYW2 2564 aaPredicted RBP11.05□□□□□ -0.64
SCARF1-201ENST00000263071 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
SCARF1-201ENST00000263071 TIMM23O14925 209 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 GAGE2AQ6NT46 116 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
SCARF1-201ENST00000263071 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 IGHG4P01861 327 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 C3orf36Q3SXR2 165 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 ZNF493Q6ZR52 646 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
SCARF1-201ENST00000263071 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
SCARF1-201ENST00000263071 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
SCARF1-201ENST00000263071 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
SCARF1-201ENST00000263071 HRCT1Q6UXD1 115 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 C3orf22Q8N5N4 141 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 MRAPQ8TCY5 172 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 CENPEQ02224 2701 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 ODF3Q96PU9 254 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 UBE2D3P61077 147 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 UBE2D2P62837 147 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 TMEM219Q86XT9 240 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
SCARF1-201ENST00000263071 H7C2G1 150 aa11.02□□□□□ -0.64
SCARF1-201ENST00000263071 GP9P14770 177 aa11.02□□□□□ -0.64
SCARF1-201ENST00000263071 GRNP28799 593 aaKnown RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms