RNA–Protein interactions for RNA: ENST00000260643.6

PREB-201, Transcript of prolactin regulatory element binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREB, Length 2,166 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-201ENST00000260643 SCGB3A1Q96QR1 104 aa17.8■□□□□ 0.44
PREB-201ENST00000260643 TSSC4Q9Y5U2 329 aaPredicted RBP17.8■□□□□ 0.44
PREB-201ENST00000260643 TACC2O95359 2948 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 GAGE13Q4V321 117 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 PRR9Q5T870 116 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 IGHV3OR16-13A0A075B7E8 117 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 IGHV3-74A0A0B4J1X5 117 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 RASL10AQ92737 203 aa17.79■□□□□ 0.44
PREB-201ENST00000260643 UBE2E1P51965 193 aa17.78■□□□□ 0.44
PREB-201ENST00000260643 C9orf139Q6ZV77 190 aa17.78■□□□□ 0.44
PREB-201ENST00000260643 M0R381 172 aa17.77■□□□□ 0.44
PREB-201ENST00000260643 SPAG8Q99932 426 aaPredicted RBP17.77■□□□□ 0.44
PREB-201ENST00000260643 LGALS1P09382 135 aaKnown RBP17.77■□□□□ 0.43
PREB-201ENST00000260643 GTSF1LQ9H1H1 148 aa17.77■□□□□ 0.43
PREB-201ENST00000260643 G3V318 75 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 ETDBQ3ZM63 59 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 MORN3Q6PF18 240 aaPredicted RBP17.76■□□□□ 0.43
PREB-201ENST00000260643 GLMPQ8WWB7 406 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 LINC00477Q96M19 166 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 DPH3P1Q9H4G8 78 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 PIEZO2Q9H5I5 2752 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 ATMQ13315 3056 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 MED14OSP0DP75 135 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 C16orf92Q96LL3 132 aa17.76■□□□□ 0.43
PREB-201ENST00000260643 IGHV3-49A0A0A0MS15 119 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 RNF223E7ERA6 249 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 AMTNQ6UX39 209 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 SH2D6Q7Z4S9 175 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 ZFAND2AQ8N6M9 145 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 ACACAQ13085 2346 aa17.75■□□□□ 0.43
PREB-201ENST00000260643 HOXA3O43365 443 aaPredicted RBP17.74■□□□□ 0.43
PREB-201ENST00000260643 BAALCQ8WXS3 180 aa17.74■□□□□ 0.43
PREB-201ENST00000260643 RAXQ9Y2V3 346 aa17.74■□□□□ 0.43
PREB-201ENST00000260643 TRAV21A0A0B4J279 112 aa17.73■□□□□ 0.43
PREB-201ENST00000260643 LINC01548A6NM66 108 aa17.73■□□□□ 0.43
PREB-201ENST00000260643 C20orf173Q96LM9 149 aa17.73■□□□□ 0.43
PREB-201ENST00000260643 C2orf66Q6UXQ4 117 aa17.73■□□□□ 0.43
PREB-201ENST00000260643 K7ENP7 123 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 NBL1P41271 181 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 ATP5G2Q06055 141 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 CYSLTR1Q9Y271 337 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 ZFHX2Q9C0A1 2572 aaPredicted RBP17.72■□□□□ 0.43
PREB-201ENST00000260643 ANKHD1Q8IWZ3 2542 aaKnown RBP17.72■□□□□ 0.43
PREB-201ENST00000260643 PPP1R17O96001 155 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 COX6B1P14854 86 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 POM121L12Q8N7R1 296 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 PRADC1Q9BSG0 188 aa17.72■□□□□ 0.43
PREB-201ENST00000260643 ZNF292O60281 2723 aa17.71■□□□□ 0.43
PREB-201ENST00000260643 IGF1P05019 195 aa17.71■□□□□ 0.43
PREB-201ENST00000260643 SMAGPQ0VAQ4 97 aa17.71■□□□□ 0.43
PREB-201ENST00000260643 KLK15Q9H2R5 256 aa17.71■□□□□ 0.43
PREB-201ENST00000260643 TMEM238LA0A1B0GVL6 79 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 PRSS29PA6NIE9 313 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 A6NJY4 79 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 OVOL1O14753 267 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 SAA4P35542 130 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 ASIPP42127 132 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 RPL39LQ96EH5 51 aaKnown RBP17.7■□□□□ 0.42
PREB-201ENST00000260643 AGRNO00468 2067 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 CCL21O00585 134 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 UBE2D1P51668 147 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 CDSNQ15517 529 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 C19orf54Q5BKX5 351 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 C5orf56Q8N8D9 126 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 ATP6V0E2Q8NHE4 81 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 FAM19A4Q96LR4 140 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 SPOCK3Q9BQ16 436 aa17.7■□□□□ 0.42
PREB-201ENST00000260643 FAM223BA6NKX1 122 aa17.69■□□□□ 0.42
PREB-201ENST00000260643 GPHB5Q86YW7 130 aa17.69■□□□□ 0.42
PREB-201ENST00000260643 APRG1Q8IVJ8 170 aa17.69■□□□□ 0.42
PREB-201ENST00000260643 FAM223AQ8IWN6 122 aa17.69■□□□□ 0.42
PREB-201ENST00000260643 RIF1Q5UIP0 2472 aaKnown RBP17.69■□□□□ 0.42
PREB-201ENST00000260643 SOCS3O14543 225 aa17.69■□□□□ 0.42
PREB-201ENST00000260643 C14orf178Q8N769 122 aaPredicted RBP17.69■□□□□ 0.42
PREB-201ENST00000260643 RPL32P62910 135 aaKnown RBP17.68■□□□□ 0.42
PREB-201ENST00000260643 OR10J6PQ8NGY7 276 aa17.68■□□□□ 0.42
PREB-201ENST00000260643 PGPEP1Q9NXJ5 209 aa17.68■□□□□ 0.42
PREB-201ENST00000260643 PHLDA3Q9Y5J5 127 aa17.68■□□□□ 0.42
PREB-201ENST00000260643 DCHS2Q6V1P9 2916 aa17.68■□□□□ 0.42
PREB-201ENST00000260643 NDUFS8O00217 210 aa17.67■□□□□ 0.42
PREB-201ENST00000260643 S100A4P26447 101 aaKnown RBP17.67■□□□□ 0.42
PREB-201ENST00000260643 CRIP2P52943 208 aaPredicted RBP17.67■□□□□ 0.42
PREB-201ENST00000260643 LINC01549A6NIU2 74 aa17.67■□□□□ 0.42
PREB-201ENST00000260643 ZNF815PA8K554 130 aa17.67■□□□□ 0.42
PREB-201ENST00000260643 ADORA2A-AS1P86434 159 aa17.67■□□□□ 0.42
PREB-201ENST00000260643 CFAP126Q5VTH2 177 aa17.67■□□□□ 0.42
PREB-201ENST00000260643 IGHV1-69DA0A0B4J2H0 117 aa17.66■□□□□ 0.42
PREB-201ENST00000260643 TRBV7-9A0A0J9YWB2 115 aa17.66■□□□□ 0.42
PREB-201ENST00000260643 NXPH4O95158 308 aa17.66■□□□□ 0.42
PREB-201ENST00000260643 ANXA2RQ3ZCQ2 193 aa17.66■□□□□ 0.42
PREB-201ENST00000260643 DLX4Q92988 240 aaPredicted RBP17.66■□□□□ 0.42
PREB-201ENST00000260643 SCGB2A2Q13296 93 aa17.65■□□□□ 0.42
PREB-201ENST00000260643 MRPL16Q9NX20 251 aaKnown RBP17.65■□□□□ 0.42
PREB-201ENST00000260643 CSMD1Q96PZ7 3565 aa17.65■□□□□ 0.42
PREB-201ENST00000260643 WNK2Q9Y3S1 2297 aa17.65■□□□□ 0.42
PREB-201ENST00000260643 CRYGDP07320 174 aa17.64■□□□□ 0.42
PREB-201ENST00000260643 PAPPA-AS1Q5QFB9 102 aa17.64■□□□□ 0.42
PREB-201ENST00000260643 INSL3P51460 131 aa17.64■□□□□ 0.41
PREB-201ENST00000260643 C1QTNF4Q9BXJ3 329 aa17.64■□□□□ 0.41
PREB-201ENST00000260643 IGHV4OR15-8A0A075B7B6 117 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms