RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
HLA-F-216ENST00000259951 FAM159AQ6UWV7 190 aa12.36□□□□□ -0.43
HLA-F-216ENST00000259951 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
HLA-F-216ENST00000259951 KCNS1Q96KK3 526 aa12.36□□□□□ -0.43
HLA-F-216ENST00000259951 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 A0A1B0GW15 77 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 F2Z2F3 143 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 MT-ND6P03923 174 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 S100A8P05109 93 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 RIGQ13278 110 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 TRPT1Q86TN4 253 aaKnown RBP12.35□□□□□ -0.43
HLA-F-216ENST00000259951 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 GNB1LQ9BYB4 327 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 C19orf73Q9NVV2 129 aa12.35□□□□□ -0.43
HLA-F-216ENST00000259951 TRAV12-2A0A075B6T6 113 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
HLA-F-216ENST00000259951 IGLC6P0CF74 106 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 IGLL1P15814 213 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 RAB5BP61020 215 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 HBBP68871 147 aa12.34□□□□□ -0.43
HLA-F-216ENST00000259951 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.43
HLA-F-216ENST00000259951 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.43
HLA-F-216ENST00000259951 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.43
HLA-F-216ENST00000259951 CTRLP40313 264 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 Q6ZQT7 251 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.43
HLA-F-216ENST00000259951 A0A1B0GXF2 115 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 HLA-DQA1P01909 254 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 TRGC2P03986 189 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 ASIPP42127 132 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 RAB4BP61018 213 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 MUC21Q5SSG8 566 aa12.33□□□□□ -0.44
HLA-F-216ENST00000259951 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 SNURFLB1AK76 121 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 INSP01308 110 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 S100A4P26447 101 aaKnown RBP12.32□□□□□ -0.44
HLA-F-216ENST00000259951 FXYD7P58549 80 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 TDRG1Q3Y452 100 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 PRR31Q5SQ13 230 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 DNLZQ5SXM8 178 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
HLA-F-216ENST00000259951 CRXO43186 299 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-216ENST00000259951 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
HLA-F-216ENST00000259951 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
HLA-F-216ENST00000259951 MED14OSP0DP75 135 aa12.31□□□□□ -0.44
HLA-F-216ENST00000259951 FRZBQ92765 325 aa12.31□□□□□ -0.44
HLA-F-216ENST00000259951 IGHV1OR15-1A0A075B7D0 117 aa12.3□□□□□ -0.44
HLA-F-216ENST00000259951 CAMPP49913 170 aa12.3□□□□□ -0.44
HLA-F-216ENST00000259951 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
HLA-F-216ENST00000259951 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
HLA-F-216ENST00000259951 CNFNQ9BYD5 112 aa12.3□□□□□ -0.44
HLA-F-216ENST00000259951 ZMAT5Q9UDW3 170 aaKnown RBP12.3□□□□□ -0.44
HLA-F-216ENST00000259951 ANK2Q01484 3957 aa12.3□□□□□ -0.44
HLA-F-216ENST00000259951 CACNG7P62955 275 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 FABP9Q0Z7S8 132 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 SSBP4Q9BWG4 385 aaPredicted RBP12.29□□□□□ -0.44
HLA-F-216ENST00000259951 C1QTNF4Q9BXJ3 329 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 MRPL18Q9H0U6 180 aaKnown RBP12.29□□□□□ -0.44
HLA-F-216ENST00000259951 SNAI2O43623 268 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
HLA-F-216ENST00000259951 VWFP04275 2813 aa12.28□□□□□ -0.44
HLA-F-216ENST00000259951 TRGV11A0A075B6L2 103 aa12.28□□□□□ -0.44
HLA-F-216ENST00000259951 H3BVH4 76 aa12.28□□□□□ -0.44
HLA-F-216ENST00000259951 TMEM256Q8N2U0 113 aa12.28□□□□□ -0.44
HLA-F-216ENST00000259951 GNRH2O43555 120 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 APCSP02743 223 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 TWIST1Q15672 202 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 DEFB125Q8N687 156 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 XCL2Q9UBD3 114 aa12.27□□□□□ -0.44
HLA-F-216ENST00000259951 PHOX2AO14813 284 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 RPL35AP18077 110 aaKnown RBP12.26□□□□□ -0.45
HLA-F-216ENST00000259951 NTF3P20783 257 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 ZFP82Q8N141 532 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 GATD1Q8NB37 220 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 FBN3Q75N90 2809 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 CBY3A6NI87 242 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 LINC01587Q99440 93 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 TMEM208Q9BTX3 173 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 SCRT2Q9NQ03 307 aa12.26□□□□□ -0.45
HLA-F-216ENST00000259951 TRGC1P0CF51 173 aa12.25□□□□□ -0.45
HLA-F-216ENST00000259951 RBMY1A1P0DJD3 496 aaKnown RBP12.25□□□□□ -0.45
HLA-F-216ENST00000259951 RBMY1CP0DJD4 496 aa12.25□□□□□ -0.45
HLA-F-216ENST00000259951 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
HLA-F-216ENST00000259951 ZNF493Q6ZR52 646 aa12.25□□□□□ -0.45
HLA-F-216ENST00000259951 SMIM15Q7Z3B0 74 aa12.25□□□□□ -0.45
HLA-F-216ENST00000259951 Q8N1Y9 231 aa12.25□□□□□ -0.45
HLA-F-216ENST00000259951 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
HLA-F-216ENST00000259951 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
HLA-F-216ENST00000259951 MUC21A0A0G2JKD1 596 aa12.24□□□□□ -0.45
HLA-F-216ENST00000259951 MUC21A0A140T8X8 626 aa12.24□□□□□ -0.45
HLA-F-216ENST00000259951 S100A6P06703 90 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms