RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 A0A087WX48 190 aa13.01□□□□□ -0.33
SLC52A1-201ENST00000254853 TRAV41A0A0B4J266 112 aa13.01□□□□□ -0.33
SLC52A1-201ENST00000254853 OR5A1Q8NGJ0 315 aa13.01□□□□□ -0.33
SLC52A1-201ENST00000254853 K7EMI3 77 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 HLA-DRB4P13762 266 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 C9orf139Q6ZV77 190 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 MRAP2Q96G30 205 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 HLA-DRB4X5D2U9 266 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 IGF2RP11717 2491 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 DEFB1P60022 68 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 C19orf54Q5BKX5 351 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 UNQ9165/PRO28630Q6UXU0 137 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 NEGR1Q7Z3B1 354 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 CEND1Q8N111 149 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 PHLDA1Q8WV24 401 aaPredicted RBP13□□□□□ -0.33
SLC52A1-201ENST00000254853 SMIM2Q9BVW6 85 aa13□□□□□ -0.33
SLC52A1-201ENST00000254853 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 ARL3P36405 182 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 UCNP55089 124 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 GPHB5Q86YW7 130 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 MOB4Q9Y3A3 225 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 M0R381 172 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
SLC52A1-201ENST00000254853 FAM223BA6NKX1 122 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 G3V4G9 280 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 FAM223AQ8IWN6 122 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 LENEPQ9Y5L5 61 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 RIPPLY3P57055 190 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 CSTL1Q9H114 145 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 KLK15Q9H2R5 256 aa12.98□□□□□ -0.33
SLC52A1-201ENST00000254853 COL6A6A6NMZ7 2263 aa12.97□□□□□ -0.33
SLC52A1-201ENST00000254853 SPTBN1Q01082 2364 aaKnown RBP12.97□□□□□ -0.33
SLC52A1-201ENST00000254853 LINC00477Q96M19 166 aa12.97□□□□□ -0.33
SLC52A1-201ENST00000254853 PLNP26678 52 aa12.96□□□□□ -0.33
SLC52A1-201ENST00000254853 RASL10AQ92737 203 aa12.96□□□□□ -0.33
SLC52A1-201ENST00000254853 ATP6V0BQ99437 205 aa12.96□□□□□ -0.33
SLC52A1-201ENST00000254853 OR10J6PQ8NGY7 276 aa12.96□□□□□ -0.33
SLC52A1-201ENST00000254853 RPL39LQ96EH5 51 aaKnown RBP12.96□□□□□ -0.33
SLC52A1-201ENST00000254853 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 SOCS3O14543 225 aa12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 SUMO2P61956 95 aaKnown RBP12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 C14orf178Q8N769 122 aaPredicted RBP12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 H7C1H1 209 aa12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 BRD3OSQ6XYD6 125 aa12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 SCGB3A1Q96QR1 104 aa12.95□□□□□ -0.34
SLC52A1-201ENST00000254853 TRAV12-1A0A0B4J245 112 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 F8VRH5 84 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 OVOL1O14753 267 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 CRIP2P52943 208 aaPredicted RBP12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 ANXA2RQ3ZCQ2 193 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 ORMDL2Q53FV1 153 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 ASIPP42127 132 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 TOMM6Q96B49 74 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 DPH3P1Q9H4G8 78 aa12.94□□□□□ -0.34
SLC52A1-201ENST00000254853 F6UB75 175 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 NDUFA4O00483 81 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 RNASE4P34096 147 aaKnown RBP12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 PHLDA3Q9Y5J5 127 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 AKAP6Q13023 2319 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 IGHV3-11P01762 117 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 MGPP08493 103 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 C20orf78Q9BR46 151 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 ZFHX3Q15911 3703 aa12.93□□□□□ -0.34
SLC52A1-201ENST00000254853 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 IGLL5B9A064 214 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 TAL2Q16559 108 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 E9PLD3 99 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 GNRH2O43555 120 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 NEXN-AS1Q8NBZ9 246 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 HIST1H4GQ99525 98 aa12.92□□□□□ -0.34
SLC52A1-201ENST00000254853 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 SLC25A16P16260 332 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 LY6EQ16553 131 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 SPOCK3Q9BQ16 436 aa12.91□□□□□ -0.34
SLC52A1-201ENST00000254853 IGHV4-39P01824 125 aa12.9□□□□□ -0.34
SLC52A1-201ENST00000254853 C2orf66Q6UXQ4 117 aa12.9□□□□□ -0.34
SLC52A1-201ENST00000254853 HIVEP3Q5T1R4 2406 aa12.9□□□□□ -0.34
SLC52A1-201ENST00000254853 TRBV7-3A0A075B6L6 115 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 OR11H12B2RN74 326 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 OR11H1Q8NG94 326 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 BAALCQ8WXS3 180 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 MYMXA0A1B0GTQ4 84 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
SLC52A1-201ENST00000254853 LY6DQ14210 128 aa12.88□□□□□ -0.35
SLC52A1-201ENST00000254853 LCNL1Q6ZST4 164 aa12.88□□□□□ -0.35
SLC52A1-201ENST00000254853 TEX48A0A1B0GUV7 120 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms