RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 GLMPQ8WWB7 406 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 ABCA2Q9BZC7 2435 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 TRBV25-1A0A075B6N4 114 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 A0A0G2JNJ9 132 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 TMEM213A2RRL7 107 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 FAM223BA6NKX1 122 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 KLRD1Q13241 179 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 LCNL1Q6ZST4 164 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 C2orf91Q6ZV80 131 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 FAM223AQ8IWN6 122 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 SMIM2Q9BVW6 85 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 Q9UFV3 132 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 NAV3Q8IVL0 2385 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 E9PLD3 99 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 VCYO14598 125 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 IGKV1-17P01599 117 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 LINC00173Q6ZV60 143 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 URB1-AS1Q96HZ7 61 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 TEX22C9J3V5 150 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 F8W735 103 aaPredicted RBP3.24□□□□□ -1.89
UBE4A-201ENST00000252108 IGLC6P0CF74 106 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 AZU1P20160 251 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 C11orf71Q6IPW1 123 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 CNFNQ9BYD5 112 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 TSSC4Q9Y5U2 329 aaPredicted RBP3.24□□□□□ -1.89
UBE4A-201ENST00000252108 TNCP24821 2201 aa3.24□□□□□ -1.89
UBE4A-201ENST00000252108 IGKV2-40A0A087WW87 121 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 TEX48A0A1B0GUV7 120 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 IGKV2D-40P01614 121 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 IGLV2-11P01706 119 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CIRBPQ14011 172 aaKnown RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 RMI2Q96E14 147 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 TMEM101Q96IK0 257 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 VKORC1Q9BQB6 163 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 EDA2RQ9HAV5 297 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 K7EIM0 57 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 NDUFA3O95167 84 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 APELAP0DMC3 54 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CMC4P56277 68 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 PAX8Q06710 450 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ATXN8Q156A1 80 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 SUMO2P61956 95 aaKnown RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 FAM159AQ6UWV7 190 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 RITA1Q96K30 269 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CITED2Q99967 270 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 GTSF1LQ9H1H1 148 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ZNRD1Q9P1U0 126 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 SS18L2Q9UHA2 77 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ZNF256Q9Y2P7 627 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 IGLV11-55A0A075B6I3 123 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 Q8N6K4 173 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 LINC01356Q8N9X3 169 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CFHR4Q92496 578 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 LINC01587Q99440 93 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ANAPC13Q9BS18 74 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 PGPEP1Q9NXJ5 209 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ERG28Q9UKR5 140 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CACNA1HO95180 2353 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CUBNO60494 3623 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 UBR5O95071 2799 aaPredicted RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 LINC01546A6NGU7 62 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 ODF3BA8MYP8 253 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 NCR2O95944 276 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 IGKV3-20P01619 116 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 RPL35AP18077 110 aaKnown RBP3.23□□□□□ -1.89
UBE4A-201ENST00000252108 HLA-DMBP28068 263 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 DIAPH2-AS1Q14236 149 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 C8orf49Q96NF6 230 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 CLUHP3Q96NS8 147 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 SPATA25Q9BR10 227 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 PLCE1Q9P212 2302 aa3.23□□□□□ -1.89
UBE4A-201ENST00000252108 TRAV40A0A0B4J280 105 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 H3BUA1 57 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 H3BVH4 76 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 SPINK8P0C7L1 97 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 FGF6P10767 208 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 RPL32P62910 135 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 GAGE2BQ13066 116 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 CDSNQ15517 529 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 GAGE2EQ4V326 116 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 PRSS57Q6UWY2 283 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 Q6ZVH6 145 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 USMG5Q96IX5 58 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 GAGE2DQ9UEU5 116 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 DIDO1Q9BTC0 2240 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 EGR2P11161 476 aaPredicted RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 PMVKQ15126 192 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 DUX3Q96PT4 197 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 MRPL35Q9NZE8 188 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 DKK2Q9UBU2 259 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 DUSP14O95147 198 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 RHOHQ15669 191 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 MRPL23Q16540 153 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 LINC00322Q6ZN03 302 aaPredicted RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 GEMIN7Q9H840 131 aaKnown RBP3.22□□□□□ -1.89
UBE4A-201ENST00000252108 ANXA2RQ3ZCQ2 193 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 LYPD2Q6UXB3 125 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 PCP2Q8IVA1 136 aa3.22□□□□□ -1.89
UBE4A-201ENST00000252108 TMEM170BQ5T4T1 132 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms