RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 ZFP69Q49AA0 526 aa14.63□□□□□ -0.07
HCFC1R1-201ENST00000248089 PRO0255Q9UI72 69 aa14.63□□□□□ -0.07
HCFC1R1-201ENST00000248089 ICOSQ9Y6W8 199 aa14.63□□□□□ -0.07
HCFC1R1-201ENST00000248089 IGHV3-16A0A0C4DH30 117 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 A0A1W2PRE2 83 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 GCGP01275 180 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 IFNA7P01567 189 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 TMEM75Q8N9X5 138 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 KCNS1Q96KK3 526 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 HHLA3Q9XRX5 114 aa14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 MRPS16Q9Y3D3 137 aaKnown RBP14.62□□□□□ -0.07
HCFC1R1-201ENST00000248089 IGLV2-11P01706 119 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 ZNF80P51504 273 aaPredicted RBP14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 CRYBA4P53673 196 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 FHL2Q14192 279 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 C6orf223Q8N319 242 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 RASL10AQ92737 203 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 ZNF479Q96JC4 524 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 UPK3BQ9BT76 320 aa14.61□□□□□ -0.07
HCFC1R1-201ENST00000248089 PKHD1P08F94 4074 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 TRAV34A0A0B4J273 112 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 MAP1LC3B2A6NCE7 125 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 M0R2P5 195 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 SLAQ13239 276 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 SMUG1Q53HV7 270 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 MAP1LC3BQ9GZQ8 125 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 PKD1P98161 4303 aa14.6□□□□□ -0.07
HCFC1R1-201ENST00000248089 ZNF345Q14585 488 aa14.59□□□□□ -0.07
HCFC1R1-201ENST00000248089 TTC32Q5I0X7 151 aa14.59□□□□□ -0.07
HCFC1R1-201ENST00000248089 KCNRGQ8N5I3 272 aa14.59□□□□□ -0.07
HCFC1R1-201ENST00000248089 LINC00479Q96M42 142 aa14.59□□□□□ -0.07
HCFC1R1-201ENST00000248089 FAM74A7A6NL05 159 aa14.58□□□□□ -0.08
HCFC1R1-201ENST00000248089 PFN1P07737 140 aaKnown RBP14.58□□□□□ -0.08
HCFC1R1-201ENST00000248089 C11orf21Q9P2W6 132 aa14.58□□□□□ -0.08
HCFC1R1-201ENST00000248089 TRAV4A0A0B4J268 109 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 FBLL1A6NHQ2 334 aaKnown RBP14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 PEX7O00628 323 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 PPT1P50897 306 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 SAPCD1Q5SSQ6 148 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 OR4C5Q8NGB2 326 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 OR11H4Q8NGC9 324 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 PCNPQ8WW12 178 aaKnown RBP14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 KRTAP1-5Q9BYS1 174 aa14.57□□□□□ -0.08
HCFC1R1-201ENST00000248089 C9JCJ5 164 aa14.56□□□□□ -0.08
HCFC1R1-201ENST00000248089 MRPL23Q16540 153 aaKnown RBP14.56□□□□□ -0.08
HCFC1R1-201ENST00000248089 ARL2-SNX15V9GYD0 113 aa14.56□□□□□ -0.08
HCFC1R1-201ENST00000248089 KANTRA0A1W2PQU2 76 aa14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 FHITP49789 147 aa14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 TNP2Q05952 138 aa14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 Q86TA4 180 aa14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 STOML3Q8TAV4 291 aa14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 ZNF471Q9BX82 626 aaPredicted RBP14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 NKX6-2Q9C056 277 aaPredicted RBP14.55□□□□□ -0.08
HCFC1R1-201ENST00000248089 HMSDA8MTL9 139 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 BCL2L11O43521 198 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 NXPH4O95158 308 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 GYPEP15421 78 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 SRIP30626 198 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 HIST1H2BAQ96A08 127 aa14.54□□□□□ -0.08
HCFC1R1-201ENST00000248089 A0A0D9SG52 128 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 K7EQD1 137 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 ZNF876PQ49A33 203 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 CST9LP1Q5W188 147 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 NEGR1Q7Z3B1 354 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 FAM213BQ8TBF2 198 aa14.53□□□□□ -0.08
HCFC1R1-201ENST00000248089 A0A1B0GV50 99 aa14.52□□□□□ -0.09
HCFC1R1-201ENST00000248089 SIVA1O15304 175 aa14.52□□□□□ -0.09
HCFC1R1-201ENST00000248089 A0A1W2PPQ1 181 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 PFDN1O60925 122 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 ORM1P02763 201 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 SEC11BP0C7V7 166 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 LYPD5Q6UWN5 251 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 C9orf85Q96MD7 179 aa14.51□□□□□ -0.09
HCFC1R1-201ENST00000248089 HERC2O95714 4834 aa14.5□□□□□ -0.09
HCFC1R1-201ENST00000248089 UBE2G1P62253 170 aa14.5□□□□□ -0.09
HCFC1R1-201ENST00000248089 SFT2D1Q8WV19 159 aa14.5□□□□□ -0.09
HCFC1R1-201ENST00000248089 KIAA1109Q2LD37 5005 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 LOC100131303A0A0U1RQF7 123 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 UMAD1C9J7I0 102 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 ZNF575Q86XF7 245 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 ZC2HC1AQ96GY0 325 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 FMC1Q96HJ9 113 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 TXNDC17Q9BRA2 123 aa14.49□□□□□ -0.09
HCFC1R1-201ENST00000248089 DNAH11Q96DT5 4516 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 IGHV3-73A0A0B4J1V6 119 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 FABP5P3A8MUU1 101 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 PAGE4O60829 102 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 RNASE3P12724 160 aaKnown RBP14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 S100A4P26447 101 aaKnown RBP14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 ZNF506Q5JVG8 444 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 DPPA3Q6W0C5 159 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 TMUB2Q71RG4 321 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 NHLRC2Q8NBF2 726 aa14.48□□□□□ -0.09
HCFC1R1-201ENST00000248089 DYNC1H1Q14204 4646 aaKnown RBP14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 IGKV3D-20A0A0C4DH25 116 aa14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 PGPEP1LA6NFU8 196 aa14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 GATA1P15976 413 aaPredicted RBP14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 ASIPP42127 132 aa14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 AKR1C3P42330 323 aa14.47□□□□□ -0.09
HCFC1R1-201ENST00000248089 EIF5AP63241 154 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms