RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 U3KQK5 164 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 AZU1P20160 251 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 LAGE3Q14657 143 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 A0A1B0GWB2 263 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 H7C2G1 150 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 TTC9CQ8N5M4 171 aa13□□□□□ -0.33
SGPP1-201ENST00000247225 ACACBO00763 2458 aa12.99□□□□□ -0.33
SGPP1-201ENST00000247225 INSL3P51460 131 aa12.99□□□□□ -0.33
SGPP1-201ENST00000247225 KLHL30-AS1Q8NEE0 82 aa12.99□□□□□ -0.33
SGPP1-201ENST00000247225 RNASE4P34096 147 aaKnown RBP12.99□□□□□ -0.33
SGPP1-201ENST00000247225 ATP5G2Q06055 141 aa12.99□□□□□ -0.33
SGPP1-201ENST00000247225 OR11H12B2RN74 326 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 PRTN3P24158 256 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 CEND1Q8N111 149 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 OR11H1Q8NG94 326 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 OR5A1Q8NGJ0 315 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 OR11H2Q8NH07 326 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 METTL26Q96S19 204 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 PHLDA3Q9Y5J5 127 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 BRD3OSQ6XYD6 125 aa12.98□□□□□ -0.33
SGPP1-201ENST00000247225 BUB3O43684 328 aa12.97□□□□□ -0.33
SGPP1-201ENST00000247225 C8orf86Q6ZUL3 223 aa12.97□□□□□ -0.33
SGPP1-201ENST00000247225 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
SGPP1-201ENST00000247225 RNF5Q99942 180 aa12.97□□□□□ -0.33
SGPP1-201ENST00000247225 TRBV6-1A0A0K0K1D8 114 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 HTN1P15515 57 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 Q8N8P6 123 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 MRPL16Q9NX20 251 aaKnown RBP12.96□□□□□ -0.33
SGPP1-201ENST00000247225 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 GNRH2O43555 120 aa12.96□□□□□ -0.33
SGPP1-201ENST00000247225 IGLL5B9A064 214 aa12.96□□□□□ -0.34
SGPP1-201ENST00000247225 ATP5LO75964 103 aa12.96□□□□□ -0.34
SGPP1-201ENST00000247225 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 SAA4P35542 130 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 SRSF1Q07955 248 aaKnown RBP eCLIP12.95□□□□□ -0.34
SGPP1-201ENST00000247225 RAXQ9Y2V3 346 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 CHTOPQ9Y3Y2 248 aaKnown RBP12.95□□□□□ -0.34
SGPP1-201ENST00000247225 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 PSMB2P49721 201 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 PRR9Q5T870 116 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 DPF1Q92782 380 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 ZNF575Q86XF7 245 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 Q8N9W7 124 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 NPBQ8NG41 125 aa12.95□□□□□ -0.34
SGPP1-201ENST00000247225 TRBV12-3P01733 135 aa12.94□□□□□ -0.34
SGPP1-201ENST00000247225 PAX8Q06710 450 aa12.94□□□□□ -0.34
SGPP1-201ENST00000247225 OR11H6Q8NGC7 330 aa12.94□□□□□ -0.34
SGPP1-201ENST00000247225 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
SGPP1-201ENST00000247225 A0A087WWL8 130 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 SIVA1O15304 175 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 PTH2Q96A98 100 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 SIGMAR1Q99720 223 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 JPT2Q9H910 190 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 MSRB2Q9Y3D2 182 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 SLC25A16P16260 332 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 GAGE13Q4V321 117 aa12.93□□□□□ -0.34
SGPP1-201ENST00000247225 SRSF8Q9BRL6 282 aaKnown RBP12.92□□□□□ -0.34
SGPP1-201ENST00000247225 SONP18583 2426 aaKnown RBP12.92□□□□□ -0.34
SGPP1-201ENST00000247225 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 SCGB1C2P0DMR2 95 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 TMEM170BQ5T4T1 132 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 UNQ9165/PRO28630Q6UXU0 137 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 ZNF256Q9Y2P7 627 aaPredicted RBP12.91□□□□□ -0.34
SGPP1-201ENST00000247225 GATD1Q8NB37 220 aa12.91□□□□□ -0.34
SGPP1-201ENST00000247225 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 PRADC1Q9BSG0 188 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 A0A087WX48 190 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 TRAV8-2A0A0B4J237 113 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 PF4V1P10720 104 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 ANXA2RQ3ZCQ2 193 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
SGPP1-201ENST00000247225 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
SGPP1-201ENST00000247225 HOXA3O43365 443 aaPredicted RBP12.9□□□□□ -0.35
SGPP1-201ENST00000247225 LINC01559Q495D7 138 aa12.9□□□□□ -0.35
SGPP1-201ENST00000247225 CLEC2AQ6UVW9 174 aa12.9□□□□□ -0.35
SGPP1-201ENST00000247225 C2orf66Q6UXQ4 117 aa12.9□□□□□ -0.35
SGPP1-201ENST00000247225 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.35
SGPP1-201ENST00000247225 EEF1AKMT3Q96AZ1 226 aa12.9□□□□□ -0.35
SGPP1-201ENST00000247225 J3QR89 54 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 FOXI2Q6ZQN5 318 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 MYO18BQ8IUG5 2567 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 NRACQ8N912 160 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 PLEKHB2Q96CS7 222 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 C20orf78Q9BR46 151 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
SGPP1-201ENST00000247225 H7C1H1 209 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 SUMO2P61956 95 aaKnown RBP12.88□□□□□ -0.35
SGPP1-201ENST00000247225 ZFP2Q6ZN57 461 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 SMIM2Q9BVW6 85 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 PRSS29PA6NIE9 313 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 ZFAND3Q9H8U3 227 aa12.88□□□□□ -0.35
SGPP1-201ENST00000247225 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms