RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 Q8N8P6 123 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 IGHV7-4-1A0A0J9YVY3 117 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 C8orf86Q6ZUL3 223 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.5
CTSD-201ENST00000236671 MED13LQ71F56 2210 aa11.9□□□□□ -0.51
CTSD-201ENST00000236671 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.51
CTSD-201ENST00000236671 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 H3BUT2 72 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 OR2K2Q8NGT1 345 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 EEF1AKMT3Q96AZ1 226 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 MRPL53Q96EL3 112 aaKnown RBP11.89□□□□□ -0.51
CTSD-201ENST00000236671 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 METTL26Q96S19 204 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 FLNAP21333 2647 aaKnown RBP11.89□□□□□ -0.51
CTSD-201ENST00000236671 A0A0G2JLM5 398 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 PSMG4Q5JS54 123 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 NRACQ8N912 160 aa11.89□□□□□ -0.51
CTSD-201ENST00000236671 ZNF207O43670 478 aaKnown RBP11.88□□□□□ -0.51
CTSD-201ENST00000236671 C9orf47Q6ZRZ4 202 aa11.88□□□□□ -0.51
CTSD-201ENST00000236671 GTF2H5Q6ZYL4 71 aa11.88□□□□□ -0.51
CTSD-201ENST00000236671 NAA38Q9BRA0 125 aaKnown RBP11.88□□□□□ -0.51
CTSD-201ENST00000236671 U3KQE9 123 aa11.88□□□□□ -0.51
CTSD-201ENST00000236671 ACANP16112 2415 aa11.88□□□□□ -0.51
CTSD-201ENST00000236671 TRBV7-1A0A0A6YYK4 115 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 CENPVL3A0A0U1RRI6 287 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 K7EP34 96 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 IGKCP01834 107 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 PRSS1P07477 247 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 Q6ZQT7 251 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 FOXC2Q99958 501 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 HIF1ANQ9NWT6 349 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 TTTY13Q9BZ97 58 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
CTSD-201ENST00000236671 TRAV26-2A0A0B4J265 109 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 ATP5LO75964 103 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 CREBBPQ92793 2442 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 DPM2O94777 84 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 TM4SF20Q53R12 229 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 C5orf56Q8N8D9 126 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 RAB37Q96AX2 223 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 VPS25Q9BRG1 176 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 SMPXQ9UHP9 88 aa11.86□□□□□ -0.51
CTSD-201ENST00000236671 SMIM15Q7Z3B0 74 aa11.85□□□□□ -0.51
CTSD-201ENST00000236671 UFC1Q9Y3C8 167 aa11.85□□□□□ -0.51
CTSD-201ENST00000236671 TLN2Q9Y4G6 2542 aa11.85□□□□□ -0.51
CTSD-201ENST00000236671 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 K7ERU9 68 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 NPFFO15130 113 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 LMO4P61968 165 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 PRR9Q5T870 116 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 GTSCR1Q86UQ5 136 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 EFNA4P52798 201 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 ATP5G2Q06055 141 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 LAGE3Q14657 143 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 CUBNO60494 3623 aa11.84□□□□□ -0.51
CTSD-201ENST00000236671 FXYD2P54710 66 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 C19orf54Q5BKX5 351 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 ZC2HC1BQ5TFG8 222 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 SELENOKQ9Y6D0 94 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 HLA-DRB4P13762 266 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 GCSHP23434 173 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 GLMPQ8WWB7 406 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 C20orf173Q96LM9 149 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 CCL19Q99731 98 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 MRPL35Q9NZE8 188 aaKnown RBP11.83□□□□□ -0.52
CTSD-201ENST00000236671 HLA-DRB4X5D2U9 266 aa11.83□□□□□ -0.52
CTSD-201ENST00000236671 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
CTSD-201ENST00000236671 H3BVH4 76 aa11.82□□□□□ -0.52
CTSD-201ENST00000236671 SAP30O75446 220 aa11.82□□□□□ -0.52
CTSD-201ENST00000236671 TRAV40A0A0B4J280 105 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 TMEM219Q86XT9 240 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 ATP6V0BQ99437 205 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 SPCS1Q9Y6A9 102 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 HIVEP1P15822 2718 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 TRAV41A0A0B4J266 112 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 IGF1P05019 195 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 MYOZ3Q8TDC0 251 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
CTSD-201ENST00000236671 FAM223BA6NKX1 122 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 FAM223AQ8IWN6 122 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 LENEPQ9Y5L5 61 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 A0A087WX48 190 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 GPHB5Q86YW7 130 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 OR5A1Q8NGJ0 315 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 MEGF9Q9H1U4 602 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 LINC00527Q9UJ94 153 aa11.8□□□□□ -0.52
CTSD-201ENST00000236671 MOB4Q9Y3A3 225 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 193.8 ms