RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
VAMP4-201ENST00000236192 A0A087WWL8 130 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 SEC61GP60059 68 aa10.06□□□□□ -0.8
VAMP4-201ENST00000236192 I3L3M4 83 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 RPS28P62857 69 aaKnown RBP10.05□□□□□ -0.8
VAMP4-201ENST00000236192 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 PRO0628Q9UI54 55 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 MRPL55Q7Z7F7 128 aaKnown RBP10.05□□□□□ -0.8
VAMP4-201ENST00000236192 TMEM86BQ8N661 226 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 PRO0461Q9UI25 63 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 PAX4O43316 350 aa10.05□□□□□ -0.8
VAMP4-201ENST00000236192 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV1-3A0A0C4DH29 117 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 LPAL2Q16609 132 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 WFDC11Q8NEX6 87 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
VAMP4-201ENST00000236192 SDIM1Q6ZPB5 146 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 JPT2Q9H910 190 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 HAMPP81172 84 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 HEATR1Q9H583 2144 aaKnown RBP10.04□□□□□ -0.8
VAMP4-201ENST00000236192 PINLYPA6NC86 204 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 MYCNOSP40205 109 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 VSIG2Q96IQ7 327 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 SIT1Q9Y3P8 196 aa10.04□□□□□ -0.8
VAMP4-201ENST00000236192 TRGV3P03979 118 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 MALP21145 153 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 KHDC1LQ5JSQ8 128 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 ZMAT4Q9H898 229 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 TRIAP1O43715 76 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 ZNF491Q8N8L2 437 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 CD59P13987 128 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 LY6DQ14210 128 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 IGKV3OR2-268A0A0C4DH90 116 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 ZNF503-AS2A6NEH8 195 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 C1orf53Q5VUE5 145 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV1-18A0A0C4DH31 117 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
VAMP4-201ENST00000236192 IGKV3-20P01619 116 aa10.02□□□□□ -0.8
VAMP4-201ENST00000236192 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.8
VAMP4-201ENST00000236192 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 TIMM17AQ99595 171 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
VAMP4-201ENST00000236192 UBE2D1P51668 147 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 F6UB75 175 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 MYO7BQ6PIF6 2116 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 GFRALQ6UXV0 394 aa10.02□□□□□ -0.81
VAMP4-201ENST00000236192 CFHR1Q03591 330 aa10.01□□□□□ -0.81
VAMP4-201ENST00000236192 C16orf97H3BN30 126 aa10.01□□□□□ -0.81
VAMP4-201ENST00000236192 NDPQ00604 133 aa10.01□□□□□ -0.81
VAMP4-201ENST00000236192 BRWD1Q9NSI6 2320 aa10.01□□□□□ -0.81
VAMP4-201ENST00000236192 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
VAMP4-201ENST00000236192 IGLV3-19P01714 112 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 C17orf82Q86X59 251 aaPredicted RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 ARHGEF17Q96PE2 2063 aaPredicted RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 DAZ2Q13117 558 aaKnown RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 DAZ1Q9NQZ3 744 aaKnown RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
VAMP4-201ENST00000236192 ORMDL1Q9P0S3 153 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 IGHV1-46P01743 117 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 TPSG1Q9NRR2 321 aa10□□□□□ -0.81
VAMP4-201ENST00000236192 PCNX3Q9H6A9 2034 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 SMIM26A0A096LP01 95 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 H7C423 109 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 RNF138Q8WVD3 245 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
VAMP4-201ENST00000236192 MED12Q93074 2177 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 IGKV1D-37A0A075B6S9 117 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 SERP1Q9Y6X1 66 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 U3KQE9 123 aa9.99□□□□□ -0.81
VAMP4-201ENST00000236192 C17orf100A8MU93 164 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 H0YGX0 51 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
VAMP4-201ENST00000236192 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 COX7A2LO14548 114 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 RNF185Q96GF1 192 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 ANAPC1Q9H1A4 1944 aa9.98□□□□□ -0.81
VAMP4-201ENST00000236192 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 A0A096LNJ9 63 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 FOXE3Q13461 319 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 DEFB109BQ30KR1 87 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 TRAV23DV6A0A075B6W5 121 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
VAMP4-201ENST00000236192 MIAQ16674 131 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 C11orf53Q8IXP5 236 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 LINC00311Q8N616 119 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 MSRB2Q9Y3D2 182 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 PAX8Q06710 450 aa9.97□□□□□ -0.81
VAMP4-201ENST00000236192 TEX36Q5VZQ5 186 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms