RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ZNF493Q6ZR52 646 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 SSBP4Q9BWG4 385 aaPredicted RBP17.66■□□□□ 0.42
RRP9-201ENST00000232888 C2CD3Q4AC94 2353 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 H3BMM0 161 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 OR5AL1P0C617 328 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 Q0VG73 95 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 DNLZQ5SXM8 178 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 AMTNQ6UX39 209 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 LINC00482Q8N8I6 264 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 CITED1Q99966 193 aa17.66■□□□□ 0.42
RRP9-201ENST00000232888 MED14OSP0DP75 135 aa17.65■□□□□ 0.42
RRP9-201ENST00000232888 KCNS1Q96KK3 526 aa17.65■□□□□ 0.42
RRP9-201ENST00000232888 SNAI2O43623 268 aa17.64■□□□□ 0.41
RRP9-201ENST00000232888 FAM110AQ9BQ89 295 aa17.64■□□□□ 0.41
RRP9-201ENST00000232888 KNCNA6PVL3 124 aa17.63■□□□□ 0.41
RRP9-201ENST00000232888 CACNG7P62955 275 aa17.63■□□□□ 0.41
RRP9-201ENST00000232888 OR10J3Q5JRS4 329 aa17.63■□□□□ 0.41
RRP9-201ENST00000232888 ZNF324O75467 553 aaPredicted RBP17.62■□□□□ 0.41
RRP9-201ENST00000232888 ASIPP42127 132 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 KIR3DS1Q14943 382 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 ANXA2RQ3ZCQ2 193 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 Q6ZQT7 251 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 NAGKQ9UJ70 344 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 SETD2Q9BYW2 2564 aaPredicted RBP17.62■□□□□ 0.41
RRP9-201ENST00000232888 IGHV4-4A0A075B6R2 117 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 IGKV3-20P01619 116 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 KIAA1644Q3SXP7 199 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 TDRG1Q3Y452 100 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 FAM159AQ6UWV7 190 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 HIST3H2BBQ8N257 126 aa17.62■□□□□ 0.41
RRP9-201ENST00000232888 LOC102724200A0A096LPH7 203 aaPredicted RBP17.61■□□□□ 0.41
RRP9-201ENST00000232888 OR11H12B2RN74 326 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 NTF3P20783 257 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 SRIP30626 198 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 TWIST1Q15672 202 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 ODF3L2Q3SX64 289 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 GFI1BQ5VTD9 330 aa17.61■□□□□ 0.41
RRP9-201ENST00000232888 INSL3P51460 131 aa17.6■□□□□ 0.41
RRP9-201ENST00000232888 SPINK13Q1W4C9 94 aa17.6■□□□□ 0.41
RRP9-201ENST00000232888 TRAV12-3A0A0B4J271 114 aa17.59■□□□□ 0.41
RRP9-201ENST00000232888 ALKBH7Q9BT30 221 aaPredicted RBP17.59■□□□□ 0.41
RRP9-201ENST00000232888 TMEM191AQ9H0A3 160 aa17.59■□□□□ 0.41
RRP9-201ENST00000232888 CYSRT1A8MQ03 144 aa17.58■□□□□ 0.41
RRP9-201ENST00000232888 M0R2Z0 102 aa17.58■□□□□ 0.41
RRP9-201ENST00000232888 S100A4P26447 101 aaKnown RBP17.58■□□□□ 0.41
RRP9-201ENST00000232888 S100A2P29034 98 aa17.58■□□□□ 0.41
RRP9-201ENST00000232888 BEAN1Q3B7T3 259 aa17.58■□□□□ 0.41
RRP9-201ENST00000232888 AMBPP02760 352 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 MUC21Q5SSG8 566 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 DMRTA1Q5VZB9 504 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 FAM104BQ5XKR9 115 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 BAGE3Q86Y29 109 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 SCRT2Q9NQ03 307 aa17.57■□□□□ 0.4
RRP9-201ENST00000232888 H3BVH4 76 aa17.56■□□□□ 0.4
RRP9-201ENST00000232888 ESDP10768 282 aa17.56■□□□□ 0.4
RRP9-201ENST00000232888 TRAV12-2A0A075B6T6 113 aa17.55■□□□□ 0.4
RRP9-201ENST00000232888 AKR1D1P51857 326 aa17.55■□□□□ 0.4
RRP9-201ENST00000232888 SMIM15Q7Z3B0 74 aa17.55■□□□□ 0.4
RRP9-201ENST00000232888 C20orf144Q9BQM9 153 aa17.55■□□□□ 0.4
RRP9-201ENST00000232888 IGHV1OR15-1A0A075B7D0 117 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 MUC21A0A0G2JKD1 596 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 MUC21A0A140T8X8 626 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 SPANXN1Q5VSR9 72 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 STHQ8IWL8 128 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 OR10AG1Q8NH19 301 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 C18orf32Q8TCD1 76 aa17.54■□□□□ 0.4
RRP9-201ENST00000232888 RBMY1BA6NDE4 496 aaKnown RBP17.53■□□□□ 0.4
RRP9-201ENST00000232888 RBMY1EA6NEQ0 496 aaKnown RBP17.53■□□□□ 0.4
RRP9-201ENST00000232888 IFITM10A6NMD0 228 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 GNRH2O43555 120 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 RBMY1DP0C7P1 496 aaKnown RBP17.53■□□□□ 0.4
RRP9-201ENST00000232888 ZNF124Q15973 351 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 C9orf66Q5T8R8 295 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 TP53TG3Q9ULZ0 132 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 WNK1Q9H4A3 2382 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 PHLDA3Q9Y5J5 127 aa17.53■□□□□ 0.4
RRP9-201ENST00000232888 CRXO43186 299 aaPredicted RBP17.52■□□□□ 0.39
RRP9-201ENST00000232888 RNASE3P12724 160 aaKnown RBP17.52■□□□□ 0.39
RRP9-201ENST00000232888 SSTP61278 116 aa17.52■□□□□ 0.39
RRP9-201ENST00000232888 TRPT1Q86TN4 253 aaKnown RBP17.52■□□□□ 0.39
RRP9-201ENST00000232888 TMEM256Q8N2U0 113 aa17.52■□□□□ 0.39
RRP9-201ENST00000232888 MCRIP2Q9BUT9 160 aaKnown RBP17.52■□□□□ 0.39
RRP9-201ENST00000232888 MSRB1Q9NZV6 116 aa17.52■□□□□ 0.39
RRP9-201ENST00000232888 U3KQK5 164 aa17.52■□□□□ 0.39
RRP9-201ENST00000232888 CD7P09564 240 aa17.51■□□□□ 0.39
RRP9-201ENST00000232888 NUTF2P61970 127 aaKnown RBP17.51■□□□□ 0.39
RRP9-201ENST00000232888 TMEM18Q96B42 140 aa17.51■□□□□ 0.39
RRP9-201ENST00000232888 SORL1Q92673 2214 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 TRGV11A0A075B6L2 103 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 SERF1AO75920 110 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 NXPH4O95158 308 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 PPBPP02775 128 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 PDZD11Q5EBL8 140 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 AMN1Q8IY45 258 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 HIST1H2BLQ99880 126 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 LINC00467Q9BRT7 94 aa17.5■□□□□ 0.39
RRP9-201ENST00000232888 KRTAP24-1Q3LI83 254 aa17.49■□□□□ 0.39
RRP9-201ENST00000232888 PACRGQ96M98 296 aaPredicted RBP17.49■□□□□ 0.39
RRP9-201ENST00000232888 IGHV3-16A0A0C4DH30 117 aa17.49■□□□□ 0.39
RRP9-201ENST00000232888 MRPL51Q4U2R6 128 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms