RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 CALYQ9NYX4 217 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 KLF13Q9Y2Y9 288 aaPredicted RBP4.45□□□□□ -1.7
RFX4-201ENST00000229387 HEATR1Q9H583 2144 aaKnown RBP4.45□□□□□ -1.7
RFX4-201ENST00000229387 TMSB15BA0A087X1C1 80 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 TRBV6-6A0A0A6YYG2 114 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 TMEM178BH3BS89 294 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 H3BVH4 76 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 ATOX1O00244 68 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 SPRY2O43597 315 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 C5orf38Q86SI9 138 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 ZCCHC24Q8N2G6 241 aaKnown RBP4.45□□□□□ -1.7
RFX4-201ENST00000229387 LINC00527Q9UJ94 153 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 TACC2O95359 2948 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
RFX4-201ENST00000229387 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 FAM27E3Q08E93 113 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 TWIST1Q15672 202 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 ZNF56Q15929 161 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 MAPKAPK5-AS1Q8N8E1 139 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 C9orf106Q8NAJ2 232 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 DEFB108BQ8NET1 73 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 PLCE1Q9P212 2302 aa4.45□□□□□ -1.7
RFX4-201ENST00000229387 COL5A1P20908 1838 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 ABCA4P78363 2273 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 ZNF292O60281 2723 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRSS46E5RG02 174 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 CD24P25063 80 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 TMEM155Q4W5P6 130 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 MIC13Q5XKP0 118 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 NTN5Q8WTR8 489 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 LEAP2Q969E1 77 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 AAMDCQ9H7C9 122 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 TLN1Q9Y490 2541 aaKnown RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 P0DMU3 169 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 FAM231AP0DMU4 169 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 FAM231CP0DMU5 169 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 IFI27P40305 119 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 SDIM1Q6ZPB5 146 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 WDR31Q8NA23 367 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 UPK3BQ9BT76 320 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 TTTY13Q9BZ97 58 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 ZNF256Q9Y2P7 627 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 ARFGEF3Q5TH69 2177 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 INTS1Q8N201 2190 aaKnown RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 H3BMM0 161 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 OVOL3O00110 214 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 VCYO14598 125 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRR20EP86478 221 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRR20CP86479 221 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRR20DP86480 221 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRR20BP86481 221 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 PRR20AP86496 221 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 TMEM200BQ69YZ2 307 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 NDUFA11Q86Y39 141 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 STHQ8IWL8 128 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 UBE2WQ96B02 151 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 ZNF71Q9NQZ8 489 aaPredicted RBP4.44□□□□□ -1.7
RFX4-201ENST00000229387 TPSG1Q9NRR2 321 aa4.44□□□□□ -1.7
RFX4-201ENST00000229387 IGKV3D-15A0A087WSY6 115 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 PRB3Q04118 309 aaPredicted RBP4.43□□□□□ -1.7
RFX4-201ENST00000229387 C1orf158Q8N1D5 194 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 KLF14Q8TD94 323 aaPredicted RBP4.43□□□□□ -1.7
RFX4-201ENST00000229387 DPH3P1Q9H4G8 78 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 CHD8Q9HCK8 2581 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 TIMM8BQ9Y5J9 83 aaPredicted RBP4.43□□□□□ -1.7
RFX4-201ENST00000229387 TRBV10-2A0A0K0K1G8 114 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 NCBP2LA6PVI3 153 aaKnown RBP4.43□□□□□ -1.7
RFX4-201ENST00000229387 F5H697 171 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 PEX7O00628 323 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 NDUFC2O95298 119 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 MYCNOSP40205 109 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 C22orf34Q6ZV56 151 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 LINC00311Q8N616 119 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 SSMEM1Q8WWF3 244 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 PGLYRP4Q96LB8 373 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 NCOR2Q9Y618 2525 aa4.43□□□□□ -1.7
RFX4-201ENST00000229387 SPRY3O43610 288 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 LOXL1Q08397 574 aaPredicted RBP4.42□□□□□ -1.7
RFX4-201ENST00000229387 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 GTSCR1Q86UQ5 136 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 VKORC1L1Q8N0U8 176 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 C16orf95Q9H693 158 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 NXT2Q9NPJ8 142 aaKnown RBP4.42□□□□□ -1.7
RFX4-201ENST00000229387 TNCP24821 2201 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 H7C1H1 209 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 M0R1B8 84 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
RFX4-201ENST00000229387 TCF15Q12870 199 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 RIGQ13278 110 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 NEXN-AS1Q8NBZ9 246 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 ZNRF1Q8ND25 227 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 PLEKHA3Q9HB20 300 aa4.42□□□□□ -1.7
RFX4-201ENST00000229387 AMMECR1Q9Y4X0 333 aaPredicted RBP4.42□□□□□ -1.7
RFX4-201ENST00000229387 SPTBN4Q9H254 2564 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms