RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 MALRD1Q5VYJ5 2156 aa10.61□□□□□ -0.71
GABPB1-201ENST00000220429 DLX6P56179 175 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 MRPL51Q4U2R6 128 aaKnown RBP10.6□□□□□ -0.71
GABPB1-201ENST00000220429 LINC01560Q8TB33 94 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 NPIPB3Q92617 1050 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 KAAG1Q9UBP8 84 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 CD3EP07766 207 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 PATE2Q6UY27 113 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 Q86TA4 180 aa10.6□□□□□ -0.71
GABPB1-201ENST00000220429 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
GABPB1-201ENST00000220429 CD7P09564 240 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 GRNP28799 593 aaKnown RBP10.59□□□□□ -0.71
GABPB1-201ENST00000220429 CKS2P33552 79 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 TMEM155Q4W5P6 130 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 C3orf22Q8N5N4 141 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 LINC00311Q8N616 119 aa10.59□□□□□ -0.71
GABPB1-201ENST00000220429 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
GABPB1-201ENST00000220429 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
GABPB1-201ENST00000220429 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 FSTL3O95633 263 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 MRAPQ8TCY5 172 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 F8WDY8 70 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 KIR2DL5BQ8NHK3 375 aa10.58□□□□□ -0.72
GABPB1-201ENST00000220429 KLK5Q9Y337 293 aaPredicted RBP10.58□□□□□ -0.72
GABPB1-201ENST00000220429 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
GABPB1-201ENST00000220429 C2orf83Q53S99 150 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 PRNTQ86SH4 94 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 E7EUB6 86 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 TIMM23O14925 209 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 LINC00305Q7Z4B0 112 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 NDUFA4L2Q9NRX3 87 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 HRNRQ86YZ3 2850 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-201ENST00000220429 LGALS1P09382 135 aaKnown RBP10.57□□□□□ -0.72
GABPB1-201ENST00000220429 IGHV1-8P0DP01 117 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 CD69Q07108 199 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 Q71RC1 249 aaPredicted RBP10.57□□□□□ -0.72
GABPB1-201ENST00000220429 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 OR4C13Q8NGP0 309 aa10.57□□□□□ -0.72
GABPB1-201ENST00000220429 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 UQCRQO14949 82 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 UCNP55089 124 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.72
GABPB1-201ENST00000220429 FBXL19-AS1Q494R0 122 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 PIMREGQ9BSJ6 248 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 LINC01546A6NGU7 62 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 ZNF785A8K8V0 405 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 IGLV2-23P01705 113 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
GABPB1-201ENST00000220429 CDSNQ15517 529 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 TMEM167AQ8TBQ9 72 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 Q9H3A6 140 aa10.56□□□□□ -0.72
GABPB1-201ENST00000220429 TRBV7-7A0A0K0K1E9 115 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 CCL21O00585 134 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 NDUFA3O95167 84 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 DLX1P56177 255 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 CGB1A6NKQ9 187 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 C10orf55Q5SWW7 151 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 LINC00526Q96FQ7 95 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 SPANXCQ9NY87 97 aa10.55□□□□□ -0.72
GABPB1-201ENST00000220429 TEX49A0A1B0GTD5 131 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 FAM236AA0A1B0GUQ0 79 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 FAM236BA0A1B0GV22 79 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 PLNP26678 52 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 RPL13AP40429 203 aaKnown RBP10.54□□□□□ -0.72
GABPB1-201ENST00000220429 ZNF56Q15929 161 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 ZNRF2Q8NHG8 242 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 IGLV2-11P01706 119 aa10.54□□□□□ -0.72
GABPB1-201ENST00000220429 ARHGAP32A7KAX9 2087 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 INS-IGF2F8WCM5 200 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 H3BTX0 84 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
GABPB1-201ENST00000220429 PRB3Q04118 309 aaPredicted RBP10.53□□□□□ -0.72
GABPB1-201ENST00000220429 WT1-ASQ06250 92 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 KLRB1Q12918 225 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
GABPB1-201ENST00000220429 TPSG1Q9NRR2 321 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 IGHV3-72A0A0B4J1Y9 119 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 LGALS9O00182 355 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 ADORA2A-AS1P86434 159 aa10.53□□□□□ -0.72
GABPB1-201ENST00000220429 SPTBN1Q01082 2364 aaKnown RBP10.53□□□□□ -0.72
GABPB1-201ENST00000220429 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.72
GABPB1-201ENST00000220429 TNFRSF6BO95407 300 aa10.52□□□□□ -0.72
GABPB1-201ENST00000220429 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.72
GABPB1-201ENST00000220429 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.72
GABPB1-201ENST00000220429 NXT2Q9NPJ8 142 aaKnown RBP10.52□□□□□ -0.72
GABPB1-201ENST00000220429 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.72
GABPB1-201ENST00000220429 NCOR2Q9Y618 2525 aa10.52□□□□□ -0.73
GABPB1-201ENST00000220429 EFNA4P52798 201 aa10.52□□□□□ -0.73
GABPB1-201ENST00000220429 SCGB1D4Q6XE38 83 aa10.52□□□□□ -0.73
GABPB1-201ENST00000220429 GOLT1AQ6ZVE7 132 aa10.52□□□□□ -0.73
GABPB1-201ENST00000220429 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
GABPB1-201ENST00000220429 IGLV1-47P01700 117 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 326.8 ms