RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CTRLP40313 264 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 PI4KAP42356 2102 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 KLK9Q9UKQ9 250 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 IGHV3-16A0A0C4DH30 117 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 H3BT86 120 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 RSPO1Q2MKA7 263 aaPredicted RBP8.23□□□□□ -1.09
VCL-201ENST00000211998 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 YPEL4Q96NS1 127 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 ZNF134P52741 427 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 SP5Q6BEB4 398 aaPredicted RBP8.23□□□□□ -1.09
VCL-201ENST00000211998 CLEC2BQ92478 149 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 CFHR4Q92496 578 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 PLXNA3P51805 1871 aa8.23□□□□□ -1.09
VCL-201ENST00000211998 HOXD3P31249 432 aaPredicted RBP8.22□□□□□ -1.09
VCL-201ENST00000211998 HERVK_113P63121 156 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 Q8N1Y9 231 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 Q9H8V8 135 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 WDR86Q86TI4 376 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 SVIPQ8NHG7 77 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 ANK1P16157 1881 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 E9PLD3 99 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 C15orf65H3BRN8 121 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 OVOL3O00110 214 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 ODF1Q14990 250 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 C17orf58Q2M2W7 97 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 LINC00643Q86TS7 51 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 CRYGCP07315 174 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 MSRB1Q9NZV6 116 aa8.22□□□□□ -1.09
VCL-201ENST00000211998 LGALS9O00182 355 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 IGLV3-1P01715 115 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 C16orf54Q6UWD8 224 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 RBAKDNA6NC62 111 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 J3QLI3 93 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 DEFB121Q5J5C9 76 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 C3orf22Q8N5N4 141 aa8.21□□□□□ -1.09
VCL-201ENST00000211998 SPINK13Q1W4C9 94 aa8.21□□□□□ -1.1
VCL-201ENST00000211998 NDUFA11Q86Y39 141 aa8.21□□□□□ -1.1
VCL-201ENST00000211998 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.1
VCL-201ENST00000211998 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 LINC01619G3V211 115 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 PSCAO43653 123 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 RNF223E7ERA6 249 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 DAD1P61803 113 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 RPL39LQ96EH5 51 aaKnown RBP8.2□□□□□ -1.1
VCL-201ENST00000211998 IGHV1OR15-1A0A075B7D0 117 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 ATP6V0E1O15342 81 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 DYNAPQ8N1N2 210 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 LINC00311Q8N616 119 aa8.2□□□□□ -1.1
VCL-201ENST00000211998 LY6HO94772 140 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
VCL-201ENST00000211998 WFDC9Q8NEX5 89 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 RHOHQ15669 191 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 INTS1Q8N201 2190 aaKnown RBP8.19□□□□□ -1.1
VCL-201ENST00000211998 SPRY2O43597 315 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 IGLC6P0CF74 106 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 DEFB131AP59861 70 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 ARTNQ5T4W7 220 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 Q71RC1 249 aaPredicted RBP8.19□□□□□ -1.1
VCL-201ENST00000211998 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
VCL-201ENST00000211998 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 PIFOQ8TCI5 191 aa8.19□□□□□ -1.1
VCL-201ENST00000211998 TEX49A0A1B0GTD5 131 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 FOXE3Q13461 319 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 RUSC1-AS1Q66K80 236 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 DOCK10Q96BY6 2186 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 M0QXV9 152 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 PLA2G2CQ5R387 149 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 SPATA25Q9BR10 227 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 LY6G6EA0A0G2JKS1 128 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 A0A0J9YXV3 536 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
VCL-201ENST00000211998 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 U3KQA8 63 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 FER1L5A0AVI2 2057 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 GNRH2O43555 120 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
VCL-201ENST00000211998 FNDC1Q4ZHG4 1894 aaPredicted RBP8.17□□□□□ -1.1
VCL-201ENST00000211998 H0YGX0 51 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 GP9P14770 177 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 AGPAT4-IT1Q9H0P7 198 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 LOXL1Q08397 574 aaPredicted RBP8.17□□□□□ -1.1
VCL-201ENST00000211998 LYPD6Q86Y78 171 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 DAND5Q8N907 189 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 C11orf1Q9H5F2 150 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 U3KQE9 123 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 NDUFA4O00483 81 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 PATE2Q6UY27 113 aa8.17□□□□□ -1.1
VCL-201ENST00000211998 IGFBPL1Q8WX77 278 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 NDUFA7O95182 113 aa8.16□□□□□ -1.1
VCL-201ENST00000211998 IGLV1-44P01699 117 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms