RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Cbln1Q9R171 193 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 AicdaQ9WVE0 198 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm36368A0A1D5RLK8 91 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Derl1Q99J56 251 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01759 136 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Rnd3P61588 244 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr1209Q3SXJ3 310 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Zfp119bQ8K0G9 543 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tcrg-C2A0A075B5Z2 167 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 Trav7-5A0A0G2JFX6 112 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01853 167 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 LbhQ9CX60 105 aa10.25□□□□□ -0.77
Trim56-201ENSMUST00000054384 MdkP12025 140 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 5930422O12RikQ8C4Y4 123 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Zfp119aQ9JIC0 545 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ccl28Q9JIL2 130 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Znf503Q7TMA2 652 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Unc119Q9Z2R6 240 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tcf23Q9JLR5 209 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 H2al1oL7MU04 110 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 PilraQ2YFS3 302 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Rtl6Q505G4 243 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Q8CDS7 251 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm20773A0A0A6YXW2 232 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm20807A0A0A6YXX7 232 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm20795J3QP49 232 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Dlx6P70397 175 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm21440Q3TTD8 232 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Adamts9E9PUN6 1931 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prss32E9Q409 334 aa10.24□□□□□ -0.77
Trim56-201ENSMUST00000054384 Slc35d2Q762D5 326 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tmem54Q9D7S1 219 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ly75Q60767 1723 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 2410004P03RikA0A087WQY2 205 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa16P50714 93 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Oosp2Q4FZG8 168 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fam214bQ8BR27 538 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 BivmQ8CBX9 502 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr477Q8VGI6 310 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gpx4Q91XR9 253 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Abca4O35600 2310 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Eda2rQ8BX35 297 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Nutf2P61971 127 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr275Q7TS18 319 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm6970F7DCP6 221 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prss46Q5M8S2 314 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 CortP56469 109 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Q0VG49 157 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm1673Q3UR78 90 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm5148Q8BGG2 154 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prb1Q91X93 504 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tnrc6aQ3UHK8 1896 aaKnown RBP10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 P18525 117 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tmem40Q4FJU9 225 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Smim19Q80ZU4 107 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Tnfsf14Q9QYH9 239 aa10.23□□□□□ -0.77
Trim56-201ENSMUST00000054384 Esp24A8R0V6 68 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 A930017K11RikE0CXQ2 571 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Lbhd2G3UW55 114 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Spint3Q3UW09 88 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa28D3Z1V9 94 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Defa25Q5G864 92 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Mzt1Q8BUR9 78 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fmc1Q9CR13 113 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Brca1P48754 1812 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Mrgprb2Q3KNA1 338 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Vgll1Q99NC0 307 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ramp3Q9WUP1 147 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Myo7bQ99MZ6 2113 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm45717A0A1B0GT68 152 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 AponG3X9D6 251 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01635 115 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ighv6-3A0A075B5T2 118 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr1192-ps1A0A1L1SRD7 309 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Zfp983E9PUT0 460 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm20825J3QM67 227 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Ssty2Q149W4 227 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Lims1Q99JW4 325 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fhl5Q9WTX7 284 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Trav7n-5A0A075B604 112 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Igkv12-44A0A140T8M2 115 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cited2O35740 269 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 CiartQ3TQ03 375 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Fbxo15Q9QZN0 433 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 H2-Ab1P01921 265 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Hoxa5P09021 270 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm9944Q8C559 102 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr1367Q8VFG2 316 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Hdgfl3Q9JMG7 202 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Bet1lO35153 111 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 P01648 108 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr1168Q7TR25 312 aa10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Prr12E9PYL2 2035 aaKnown RBP10.22□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm28372A0A087WNV0 220 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Awat1A2ADU9 328 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Cisd3B1AR13 137 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Gm42957D6RFQ2 366 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 GlulP15105 373 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Olfr976Q8VF15 326 aa10.21□□□□□ -0.77
Trim56-201ENSMUST00000054384 Shank3Q4ACU6 1730 aa10.21□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 85.2 ms