RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 NMUP48645 174 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 ADAMTSL5Q6ZMM2 481 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 IGKV3D-20A0A0C4DH25 116 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 CLPSL1A2RUU4 121 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 AKAP6Q13023 2319 aa10.66□□□□□ -0.7
PHGDH-233ENST00000642021 A1L4Q6 167 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.7
PHGDH-233ENST00000642021 G3V318 75 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 SCGB1A1P11684 91 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 LEPP41159 167 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 HERV-K104P63124 156 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 ATP6V0E1O15342 81 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 CKS1BP61024 79 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 MINOS1Q5TGZ0 78 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 AGPAT4-IT1Q9H0P7 198 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 SIRPDQ9H106 197 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 MAP1LC3AQ9H492 121 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 CELSR1Q9NYQ6 3014 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 COL6A6A6NMZ7 2263 aa10.65□□□□□ -0.7
PHGDH-233ENST00000642021 IGKV2D-26A0A0A0MRZ7 120 aa10.65□□□□□ -0.71
PHGDH-233ENST00000642021 LINC01559Q495D7 138 aa10.65□□□□□ -0.71
PHGDH-233ENST00000642021 DTX2Q86UW9 622 aa10.65□□□□□ -0.71
PHGDH-233ENST00000642021 OOSP1A8MZH6 123 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 G3V4G9 280 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 ZNF207O43670 478 aaKnown RBP10.64□□□□□ -0.71
PHGDH-233ENST00000642021 BRI3O95415 125 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 SRSF2Q01130 221 aaKnown RBP10.64□□□□□ -0.71
PHGDH-233ENST00000642021 CLEC19AQ6UXS0 136 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-233ENST00000642021 CCDC140Q96MF4 163 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 TRGV3P03979 118 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 AZU1P20160 251 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 KIR3DS1Q14943 382 aa10.64□□□□□ -0.71
PHGDH-233ENST00000642021 TRAV8-2A0A0B4J237 113 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 H3BUT2 72 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 C9orf118A6NHY6 69 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 H3BRM9 83 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 SCGB2A1O75556 95 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 FCER1GP30273 86 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 TM4SF20Q53R12 229 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 OR9G4Q8NGQ1 327 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
PHGDH-233ENST00000642021 HSD52Q0P140 79 aa10.62□□□□□ -0.71
PHGDH-233ENST00000642021 UFSP1Q6NVU6 142 aa10.62□□□□□ -0.71
PHGDH-233ENST00000642021 NPFFR1Q9GZQ6 430 aa10.62□□□□□ -0.71
PHGDH-233ENST00000642021 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
PHGDH-233ENST00000642021 IGLV2-18A0A075B6J9 118 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 TRAV26-2A0A0B4J265 109 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 SIVA1O15304 175 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 GTSF1LQ9H1H1 148 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 A6NDN8 102 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 PRSS1P07477 247 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 CITED1Q99966 193 aa10.61□□□□□ -0.71
PHGDH-233ENST00000642021 SAA4P35542 130 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
PHGDH-233ENST00000642021 IGHV7-4-1A0A0J9YVY3 117 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 RBAKDNA6NC62 111 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 OR4X2Q8NGF9 303 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 A0A0G2JLM5 398 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 UBE2E1P51965 193 aa10.6□□□□□ -0.71
PHGDH-233ENST00000642021 KLK9Q2XQG4 91 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 OR2K2Q8NGT1 345 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 FOXC2Q99958 501 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 SLC50A1Q9BRV3 221 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 KLK9Q9UKQ9 250 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 IGF1P05019 195 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 COL25A1Q9BXS0 654 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-233ENST00000642021 LINC00527Q9UJ94 153 aa10.59□□□□□ -0.71
PHGDH-233ENST00000642021 SPRY2O43597 315 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 Q8N8P6 123 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 NRACQ8N912 160 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 SS18L2Q9UHA2 77 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 CENPVL3A0A0U1RRI6 287 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 SMIM17P0DL12 118 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 FXYD2P54710 66 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 TMEM78Q5T7P6 136 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
PHGDH-233ENST00000642021 IGKCP01834 107 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 PRR9Q5T870 116 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 UFC1Q9Y3C8 167 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 TMEM8BA6NDV4 472 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 K7EP34 96 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
PHGDH-233ENST00000642021 TMEM219Q86XT9 240 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms