RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 IGHV4-30-4P0DP06 118 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 GNG4P50150 75 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF138P52744 262 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 TAS2R60P59551 318 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 SOHLH1Q5JUK2 328 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 TRPT1Q86TN4 253 aaKnown RBP6.9□□□□□ -1.3
PHGDH-228ENST00000641847 Q8N1Y9 231 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 SMIM7Q9BQ49 75 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 NDFIP1Q9BT67 221 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 SRD5A3Q9H8P0 318 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 PPP1R14DQ9NXH3 145 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 ZNF492Q9P255 531 aa6.9□□□□□ -1.3
PHGDH-228ENST00000641847 DNAH10Q8IVF4 4471 aa6.9□□□□□ -1.31
PHGDH-228ENST00000641847 TMEM218A2RU14 115 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 A8MTW9 85 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 A8MZ25 164 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 C9JCJ5 164 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 LTAP01374 205 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 RPL35AP18077 110 aaKnown RBP6.89□□□□□ -1.31
PHGDH-228ENST00000641847 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 LEPP41159 167 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 FAM74A3Q4VXF1 159 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 AMTNQ6UX39 209 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 BAGE2Q86Y30 109 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 NHLRC2Q8NBF2 726 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 LINC00477Q96M19 166 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 ODF3Q96PU9 254 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 TUBA4BQ9H853 241 aa6.89□□□□□ -1.31
PHGDH-228ENST00000641847 TRBV20OR9-2A0A075B6H5 130 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 PGPEP1LA6NFU8 196 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 F8W036 122 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 J3KRW8 73 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 FXYD7P58549 80 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 PRR9Q5T870 116 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 TVP23CQ96ET8 276 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 C8orf49Q96NF6 230 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 ZFP30Q9Y2G7 519 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 TMA7Q9Y2S6 64 aaKnown RBP6.88□□□□□ -1.31
PHGDH-228ENST00000641847 LENEPQ9Y5L5 61 aa6.88□□□□□ -1.31
PHGDH-228ENST00000641847 ABCA13Q86UQ4 5058 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 TRBV7-9A0A0J9YWB2 115 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 M0R2Z0 102 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 IGLV2-8P01709 118 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 MGST1P10620 155 aaKnown RBP6.87□□□□□ -1.31
PHGDH-228ENST00000641847 CRISP2P16562 243 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 TSPOP30536 169 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 SPINK13Q1W4C9 94 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 SAPCD1Q5SSQ6 148 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 ZFAND2AQ8N6M9 145 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 NIPSNAP3BQ9BS92 247 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
PHGDH-228ENST00000641847 AGRNO00468 2067 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 TRAV12-2A0A075B6T6 113 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 LOC102724200A0A096LPH7 203 aaPredicted RBP6.86□□□□□ -1.31
PHGDH-228ENST00000641847 KRBOX1C9JBD0 128 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 CDKN1BP46527 198 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 NUTF2P61970 127 aaKnown RBP6.86□□□□□ -1.31
PHGDH-228ENST00000641847 BTN1A1Q13410 526 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 ADIRFQ15847 76 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 TMEM241Q24JQ0 296 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 GFI1BQ5VTD9 330 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 PRR27Q6MZM9 219 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
PHGDH-228ENST00000641847 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 ZC2HC1AQ96GY0 325 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 MLST8Q9BVC4 326 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 LY96Q9Y6Y9 160 aa6.86□□□□□ -1.31
PHGDH-228ENST00000641847 C7orf71A4D174 169 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 KLLNB2CW77 178 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 K7EN84 100 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 CA1P00915 261 aaPredicted RBP6.85□□□□□ -1.31
PHGDH-228ENST00000641847 GCGP01275 180 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 GPX1P07203 203 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 RNASE4P34096 147 aaKnown RBP6.85□□□□□ -1.31
PHGDH-228ENST00000641847 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
PHGDH-228ENST00000641847 KIR3DS1Q14943 382 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 C10orf91Q5T1B1 145 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 COX8CQ7Z4L0 72 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 OCC1Q8TAD7 63 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 SDF2L1Q9HCN8 221 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
PHGDH-228ENST00000641847 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
PHGDH-228ENST00000641847 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-228ENST00000641847 SH2D1AO60880 128 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 INSP01308 110 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 AMBPP02760 352 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 ZNF80P51504 273 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-228ENST00000641847 APOC4P55056 127 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
PHGDH-228ENST00000641847 OR5I1Q13606 314 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 FAM162BQ5T6X4 162 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 CSTL1Q9H114 145 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 BIN3Q9NQY0 253 aa6.84□□□□□ -1.31
PHGDH-228ENST00000641847 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms