RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 LINC01587Q99440 93 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 C20orf144Q9BQM9 153 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 DERL1Q9BUN8 251 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 KLF12Q9Y4X4 402 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 DNHD1Q96M86 4753 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 SORL1Q92673 2214 aa9.53□□□□□ -0.88
PHGDH-220ENST00000641570 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 C9JCJ5 164 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 HTN1P15515 57 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 CRISP2P16562 243 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 FAM159AQ6UWV7 190 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
PHGDH-220ENST00000641570 A8MTW9 85 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 H7BYZ3 331 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
PHGDH-220ENST00000641570 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
PHGDH-220ENST00000641570 BTN1A1Q13410 526 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 OR5I1Q13606 314 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 ADIRFQ15847 76 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 DEFB135Q30KP9 77 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 GFI1BQ5VTD9 330 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 Q6ZWC4 215 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 C8orf49Q96NF6 230 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 SPATA25Q9BR10 227 aa9.51□□□□□ -0.89
PHGDH-220ENST00000641570 MGAM2Q2M2H8 2515 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 XKRY2A2RUG3 117 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 CBY3A6NI87 242 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 SPRY2O43597 315 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 ORM1P02763 201 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 AMTNQ6UX39 209 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 EIF4E3Q8N5X7 224 aaKnown RBP9.5□□□□□ -0.89
PHGDH-220ENST00000641570 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 KCNS1Q96KK3 526 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 SDF2L1Q9HCN8 221 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 LY96Q9Y6Y9 160 aa9.5□□□□□ -0.89
PHGDH-220ENST00000641570 TRGV11A0A075B6L2 103 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 KLLNB2CW77 178 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 P01737 135 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 S100A4P26447 101 aaKnown RBP9.49□□□□□ -0.89
PHGDH-220ENST00000641570 ERVFC1-1P60608 527 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 RRN3P1Q2M238 152 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 PYGO2Q9BRQ0 406 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 CMYA5Q8N3K9 4069 aa9.49□□□□□ -0.89
PHGDH-220ENST00000641570 FBN3Q75N90 2809 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 TMEM218A2RU14 115 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 M0R036 132 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
PHGDH-220ENST00000641570 ZFAND2AQ8N6M9 145 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 ZC2HC1AQ96GY0 325 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
PHGDH-220ENST00000641570 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 TMEM189A5PLL7 270 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 B4DEV8 164 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 KRBOX1C9JBD0 128 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 SH2D1AO60880 128 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 RPS20P60866 119 aaKnown RBP9.47□□□□□ -0.89
PHGDH-220ENST00000641570 MUC21Q5SSG8 566 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
PHGDH-220ENST00000641570 Q6AWC8 147 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 OR11H2Q8NH07 326 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
PHGDH-220ENST00000641570 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-220ENST00000641570 SNURFLB1AK76 121 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 C9JQL5 133 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 RNF183Q96D59 192 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 SEC11CQ9BY50 192 aa9.46□□□□□ -0.9
PHGDH-220ENST00000641570 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
PHGDH-220ENST00000641570 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-220ENST00000641570 MIFP14174 115 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 ASIPP42127 132 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 PRR9Q5T870 116 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 LINC00322Q6ZN03 302 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-220ENST00000641570 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 OR2D3Q8NGH3 330 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 BORCS7Q96B45 105 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
PHGDH-220ENST00000641570 PKD1L1Q8TDX9 2849 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 CRXO43186 299 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-220ENST00000641570 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 MLST8Q9BVC4 326 aa9.44□□□□□ -0.9
PHGDH-220ENST00000641570 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
PHGDH-220ENST00000641570 TIMM8BQ9Y5J9 83 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-220ENST00000641570 TRBV20OR9-2A0A075B6H5 130 aa9.43□□□□□ -0.9
PHGDH-220ENST00000641570 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
PHGDH-220ENST00000641570 APOC3P02656 99 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms