RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 SIGLEC8Q9NYZ4 499 aa13.63□□□□□ -0.23
PHGDH-209ENST00000641074 TMEM189A5PLL7 270 aa13.63□□□□□ -0.23
PHGDH-209ENST00000641074 FAM231BA6NCW3 169 aa13.63□□□□□ -0.23
PHGDH-209ENST00000641074 ACTL10Q5JWF8 245 aa13.63□□□□□ -0.23
PHGDH-209ENST00000641074 TMSB15BA0A087X1C1 80 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 CD33P20138 364 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 FABP9Q0Z7S8 132 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 PRR9Q5T870 116 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 ZFAND2AQ8N6M9 145 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 TRAPPC1Q9Y5R8 145 aa13.62□□□□□ -0.23
PHGDH-209ENST00000641074 FOXA3P55318 350 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-209ENST00000641074 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
PHGDH-209ENST00000641074 A0A0J9YX75 114 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 LOC105371267A0A1B0GV96 52 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 ZNF575Q86XF7 245 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 J3KRW8 73 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BKO60814 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 ORM1P02763 201 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BJP06899 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 TRGC1P0CF51 173 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BOP23527 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BBP33778 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BDP58876 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BCP62807 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST2H2BEQ16778 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.6□□□□□ -0.23
PHGDH-209ENST00000641074 Q6ZQT7 251 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BHQ93079 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BNQ99877 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 HIST1H2BMQ99879 126 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 GNB1LQ9BYB4 327 aa13.6□□□□□ -0.23
PHGDH-209ENST00000641074 SORL1Q92673 2214 aa13.59□□□□□ -0.23
PHGDH-209ENST00000641074 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
PHGDH-209ENST00000641074 EBLN2Q6P2I7 272 aa13.59□□□□□ -0.23
PHGDH-209ENST00000641074 SPAG8Q99932 426 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-209ENST00000641074 SAV1Q9H4B6 383 aaPredicted RBP13.59□□□□□ -0.23
PHGDH-209ENST00000641074 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
PHGDH-209ENST00000641074 TRAV25A0A0B4J276 109 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 XKRY2A2RUG3 117 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 SNURFLB1AK76 121 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 CRISP2P16562 243 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 DEFB131AP59861 70 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 LINC01559Q495D7 138 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 TMEM136Q6ZRR5 245 aa13.58□□□□□ -0.23
PHGDH-209ENST00000641074 ZNF256Q9Y2P7 627 aaPredicted RBP13.58□□□□□ -0.23
PHGDH-209ENST00000641074 A0A1B0GXF2 115 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 GPX1P07203 203 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
PHGDH-209ENST00000641074 KIR3DS1Q14943 382 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 WDR73Q6P4I2 378 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 RASL11AQ6T310 242 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 ATP5L2Q7Z4Y8 100 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 APRG1Q8IVJ8 170 aa13.58□□□□□ -0.24
PHGDH-209ENST00000641074 MRPL18Q9H0U6 180 aaKnown RBP13.58□□□□□ -0.24
PHGDH-209ENST00000641074 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 OR4C46A6NHA9 309 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 SAP30O75446 220 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 RAB4BP61018 213 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 COX19Q49B96 90 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 TPPP3Q9BW30 176 aa13.57□□□□□ -0.24
PHGDH-209ENST00000641074 IGKV3-20P01619 116 aa13.56□□□□□ -0.24
PHGDH-209ENST00000641074 S100A6P06703 90 aa13.56□□□□□ -0.24
PHGDH-209ENST00000641074 RNASE4P34096 147 aaKnown RBP13.56□□□□□ -0.24
PHGDH-209ENST00000641074 CAMPP49913 170 aa13.56□□□□□ -0.24
PHGDH-209ENST00000641074 Q6AWC8 147 aa13.56□□□□□ -0.24
PHGDH-209ENST00000641074 TEP1Q99973 2627 aaKnown RBP13.56□□□□□ -0.24
PHGDH-209ENST00000641074 PF4P02776 101 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 ODF3Q96PU9 254 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 MAP6D1Q9H9H5 199 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 TRAV21A0A0B4J279 112 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 GRIFINA4D1Z8 144 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 KNCNA6PVL3 124 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 KLLNB2CW77 178 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 DUSP14O95147 198 aaKnown RBP13.55□□□□□ -0.24
PHGDH-209ENST00000641074 MT-ND6P03923 174 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 SNRPEP62304 92 aaKnown RBP13.55□□□□□ -0.24
PHGDH-209ENST00000641074 HBBP68871 147 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 LINC00482Q8N8I6 264 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 CITED1Q99966 193 aa13.55□□□□□ -0.24
PHGDH-209ENST00000641074 TENM1Q9UKZ4 2725 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 AGRNO00468 2067 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 A0A1B0GUT8 65 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 NDUFA6P56556 154 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 ZNF124Q15973 351 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 LYZL1Q6UWQ5 148 aa13.54□□□□□ -0.24
PHGDH-209ENST00000641074 C5orf52A6NGY3 159 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 IGLV1-51P01701 117 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 HLA-DQA1P01909 254 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 IGLC6P0CF74 106 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 FER1L6-AS1Q8NA97 138 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 LEPP41159 167 aa13.53□□□□□ -0.24
PHGDH-209ENST00000641074 HLA-DRB4P13762 266 aa13.52□□□□□ -0.25
PHGDH-209ENST00000641074 AMTNQ6UX39 209 aa13.52□□□□□ -0.25
PHGDH-209ENST00000641074 NAGKQ9UJ70 344 aa13.52□□□□□ -0.25
PHGDH-209ENST00000641074 HLA-DRB4X5D2U9 266 aa13.52□□□□□ -0.25
PHGDH-209ENST00000641074 H3BMM0 161 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms