RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 KLHL30-AS1Q8NEE0 82 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 SVIPQ8NHG7 77 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 LINC01560Q8TB33 94 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 VKORC1Q9BQB6 163 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 AAMDCQ9H7C9 122 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 SMPXQ9UHP9 88 aa10.74□□□□□ -0.69
SCARB2-227ENST00000640957 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-227ENST00000640957 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-227ENST00000640957 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-227ENST00000640957 SIVA1O15304 175 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 MBD3L2Q8NHZ7 208 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-227ENST00000640957 RNF125Q96EQ8 232 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 B5MCH6 92 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 CRYGCP07315 174 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 C8orf86Q6ZUL3 223 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
SCARB2-227ENST00000640957 TRBV20-1A0A075B6N2 111 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 C17orf100A8MU93 164 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 ATP5IP56385 69 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-227ENST00000640957 PAX8Q06710 450 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 C3orf56Q8N813 242 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 RPEQ96AT9 228 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 DOPEY2Q9Y3R5 2298 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 A0A0G2JNJ9 132 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 SCGB1D4Q6XE38 83 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 Q9UFV3 132 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 SORL1Q92673 2214 aa10.72□□□□□ -0.69
SCARB2-227ENST00000640957 PRTN3P24158 256 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
SCARB2-227ENST00000640957 SRSF9Q13242 221 aaKnown RBP eCLIP10.71□□□□□ -0.69
SCARB2-227ENST00000640957 ADIPOQQ15848 244 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 ZNF491Q8N8L2 437 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 ZNF502Q8TBZ5 544 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 RRN3P1Q2M238 152 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 DTX2Q86UW9 622 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 ONECUT1Q9UBC0 465 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 PIEZO1Q92508 2521 aa10.71□□□□□ -0.69
SCARB2-227ENST00000640957 FOXI1Q12951 378 aa10.71□□□□□ -0.7
SCARB2-227ENST00000640957 PIP4P1Q86T03 277 aa10.71□□□□□ -0.7
SCARB2-227ENST00000640957 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.7
SCARB2-227ENST00000640957 CDIP1Q9H305 208 aa10.71□□□□□ -0.7
SCARB2-227ENST00000640957 TEX22C9J3V5 150 aa10.7□□□□□ -0.7
SCARB2-227ENST00000640957 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
SCARB2-227ENST00000640957 DPF1Q92782 380 aa10.7□□□□□ -0.7
SCARB2-227ENST00000640957 PRR25Q96S07 402 aa10.7□□□□□ -0.7
SCARB2-227ENST00000640957 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-227ENST00000640957 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
SCARB2-227ENST00000640957 PRO0461Q9UI25 63 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 HIVEP3Q5T1R4 2406 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 POLQO75417 2590 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 I3L2K1 104 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 HOXA3O43365 443 aaPredicted RBP10.69□□□□□ -0.7
SCARB2-227ENST00000640957 IL17RELQ6ZVW7 336 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
SCARB2-227ENST00000640957 TLN2Q9Y4G6 2542 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 NCBP2LA6PVI3 153 aaKnown RBP10.68□□□□□ -0.7
SCARB2-227ENST00000640957 DEFB1P60022 68 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 MORN3Q6PF18 240 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-227ENST00000640957 U3KQK5 164 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 MYO18BQ8IUG5 2567 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 SETD2Q9BYW2 2564 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-227ENST00000640957 K7EIM0 57 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 FAM57AQ8TBR7 257 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 ANAPC13Q9BS18 74 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 HIF1ANQ9NWT6 349 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 Q6ZS92 163 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 CFHR4Q92496 578 aa10.68□□□□□ -0.7
SCARB2-227ENST00000640957 IGLV3-9A0A075B6K5 115 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 SCGB1C2P0DMR2 95 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 GRNP28799 593 aaKnown RBP10.67□□□□□ -0.7
SCARB2-227ENST00000640957 DYNAPQ8N1N2 210 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 OR11H12B2RN74 326 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 H3BRN7 92 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 IGHV1-8P0DP01 117 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 Q6ZUT4 128 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 OR11H1Q8NG94 326 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 OR11H2Q8NH07 326 aa10.67□□□□□ -0.7
SCARB2-227ENST00000640957 LOXP28300 417 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-227ENST00000640957 RAX2Q96IS3 184 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 IGHV1-3A0A0C4DH29 117 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 HOXB4P17483 251 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-227ENST00000640957 IGFL2Q6UWQ7 119 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 ZNF575Q86XF7 245 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 ZNF48Q96MX3 618 aaPredicted RBP10.66□□□□□ -0.7
SCARB2-227ENST00000640957 M0R381 172 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 SLC25A16P16260 332 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 RNASE6Q93091 150 aaKnown RBP10.66□□□□□ -0.7
SCARB2-227ENST00000640957 C11orf21Q9P2W6 132 aa10.66□□□□□ -0.7
SCARB2-227ENST00000640957 IGKV3-7A0A075B6H7 116 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 A0A1B0GW15 77 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 ZNF815PA8K554 130 aa10.65□□□□□ -0.7
SCARB2-227ENST00000640957 TMEM178BH3BS89 294 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms