RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	SEC22C	Q9BRL7	303 aa		7.58	□□□□□ -1.2
PAX6-238	ENST00000638755	ARL6	Q9H0F7	186 aa		7.58	□□□□□ -1.2
PAX6-238	ENST00000638755	NUDT15	Q9NV35	164 aa		7.58	□□□□□ -1.2
PAX6-238	ENST00000638755	LPA	P08519	4548 aa		7.58	□□□□□ -1.2
PAX6-238	ENST00000638755	IGHV1OR15-1	A0A075B7D0	117 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	FAM240B	A0A1B0GVZ2	78 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	DUXB	A0A1W2PPF3	345 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	H2AFB2	P0C5Z0	115 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	PLP1	P60201	277 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	OPCML	Q14982	345 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	ATP6V0E2	Q8NHE4	81 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	ARV1	Q9H2C2	271 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	PXMP4	Q9Y6I8	212 aa		7.57	□□□□□ -1.2
PAX6-238	ENST00000638755	IGHV3-16	A0A0C4DH30	117 aa		7.56	□□□□□ -1.2
PAX6-238	ENST00000638755	CCS	O14618	274 aa		7.56	□□□□□ -1.2
PAX6-238	ENST00000638755	RPP30	P78346	268 aa	Known RBP	7.56	□□□□□ -1.2
PAX6-238	ENST00000638755	LINC00305	Q7Z4B0	112 aa		7.56	□□□□□ -1.2
PAX6-238	ENST00000638755	BPIFA4P	Q86YQ2	179 aa		7.56	□□□□□ -1.2
PAX6-238	ENST00000638755	RNF24	Q9Y225	148 aa		7.56	□□□□□ -1.2
PAX6-238	ENST00000638755		H3BQ15	152 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	WRB	O00258	174 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	PFN1	P07737	140 aa	Known RBP	7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	SPANXN5	Q5MJ07	72 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	PRR9	Q5T870	116 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	MZT2B	Q6NZ67	158 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	NRARP	Q7Z6K4	114 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	DAZ4	Q86SG3	579 aa	Known RBP	7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	HSD17B11	Q8NBQ5	300 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	OR4C5	Q8NGB2	326 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	MITD1	Q8WV92	249 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	DAZ3	Q9NR90	486 aa	Known RBP	7.55	□□□□□ -1.2
PAX6-238	ENST00000638755	COX11	Q9Y6N1	276 aa		7.55	□□□□□ -1.2
PAX6-238	ENST00000638755		A0A0D9SG52	128 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755		H3BP45	60 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	SLC25A6	P12236	298 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	SELENOT	P62341	195 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	POLR2G	P62487	172 aa	Known RBP eCLIP	7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	MUC21	Q5SSG8	566 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	ENKUR	Q8TC29	256 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	RASL10A	Q92737	203 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	SAT2	Q96F10	170 aa	Predicted RBP	7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	FAM19A4	Q96LR4	140 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	AGPAT4-IT1	Q9H0P7	198 aa		7.54	□□□□□ -1.2
PAX6-238	ENST00000638755	IGKV2D-24	A0A075B6R9	120 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	TRAV4	A0A0B4J268	109 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	GGTLC3	B5MD39	225 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755		M0R3E3	92 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	SYNGR2	O43760	224 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	IGLC2	P0DOY2	106 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	IAH1	Q2TAA2	248 aa	Predicted RBP	7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	TOR2A	Q5JU69	321 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	FFAR4	Q5NUL3	377 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	FAM122C	Q6P4D5	195 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	C12orf45	Q8N5I9	185 aa	Predicted RBP	7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	DNAJC30	Q96LL9	226 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	LINC01600	Q96MT4	127 aa		7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	CIB3	Q96Q77	187 aa	Predicted RBP	7.53	□□□□□ -1.2
PAX6-238	ENST00000638755	TRAV8-1	A0A0A6YYK1	113 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	PIGBOS1	A0A0B4J2F0	54 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	FAM25E	A8MYX2	175 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	SSSCA1	O60232	199 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	MED6	O75586	246 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	SCGB1D2	O95969	90 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	CRISP2	P16562	243 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	ID3	Q02535	119 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	ZFAND2A	Q8N6M9	145 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	RMI2	Q96E14	147 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	LINC00477	Q96M19	166 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	GSKIP	Q9P0R6	139 aa		7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	7.52	□□□□□ -1.21
PAX6-238	ENST00000638755	INMT-MINDY4	F8WBC2	141 aa		7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	GATA1	P15976	413 aa	Predicted RBP	7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	RRAS2	P62070	204 aa	Predicted RBP	7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	SLC38A11	Q08AI6	406 aa		7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	VWC2	Q2TAL6	325 aa		7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	SPX	Q9BT56	116 aa		7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	GTSF1L	Q9H1H1	148 aa		7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	STRAP	Q9Y3F4	350 aa	Known RBP	7.51	□□□□□ -1.21
PAX6-238	ENST00000638755	PANO1	I0J062	215 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	COX7A2P2	O60397	106 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	SIX6	O95475	246 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	MBP	P02686	304 aa	Predicted RBP	7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	TMEM183B	Q1AE95	376 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	TMEM183A	Q8IXX5	376 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	SLC25A29	Q8N8R3	303 aa		7.5	□□□□□ -1.21
PAX6-238	ENST00000638755	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	C5orf51	A6NDU8	294 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	GOSR2	O14653	212 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	IGKV2D-40	P01614	121 aa	Predicted RBP	7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	NMB	P08949	121 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	DEFA1	P59665	94 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	DEFA3	P59666	94 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	GUK1	Q16774	197 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	TMEM78	Q5T7P6	136 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	PXDC1	Q5TGL8	231 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	PRADC1	Q9BSG0	188 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	MARVELD1	Q9BSK0	173 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	PSENEN	Q9NZ42	101 aa		7.49	□□□□□ -1.21
PAX6-238	ENST00000638755	LSM5	Q9Y4Y9	91 aa	Known RBP	7.49	□□□□□ -1.21
PAX6-238	ENST00000638755		A0A0U1RQV1	116 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms