RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	CITED2	Q99967	270 aa	Predicted RBP	9.52	□□□□□ -0.89
PATJ-215	ENST00000635137	PSG8	Q9UQ74	426 aa		9.52	□□□□□ -0.89
PATJ-215	ENST00000635137	F8	P00451	2351 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	CCL24	O00175	119 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	IGLV2-8	P01709	118 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	SLURP1	P55000	103 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	RBX1	P62877	108 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	C18orf65	Q6ZTR6	163 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	PRNT	Q86SH4	94 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	MLST8	Q9BVC4	326 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	CCL25	O15444	150 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	IBA57	Q5T440	356 aa	Known RBP	9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	FAM231D	Q6ZW35	169 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137		Q86TA4	180 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	NDFIP1	Q9BT67	221 aa		9.51	□□□□□ -0.89
PATJ-215	ENST00000635137	KRTDAP	P60985	99 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	FHL3	Q13643	280 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	BAGE3	Q86Y29	109 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	C11orf44	Q8N8P7	122 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	DAZAP1	Q96EP5	407 aa	Known RBP	9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	RCHY1	Q96PM5	261 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	SAMD10	Q9BYL1	202 aa		9.5	□□□□□ -0.89
PATJ-215	ENST00000635137	OVOL1	O14753	267 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	IGLV2-11	P01706	119 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	RPL19	P84098	196 aa	Known RBP	9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	RAX2	Q96IS3	184 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	SGK494	Q96LW2	274 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	TRAV8-1	A0A0A6YYK1	113 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	TRAV8-2	A0A0B4J237	113 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137		A0A1W2PRX2	142 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	GPX1	P07203	203 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	CT45A10	P0DMU9	189 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	SNRPD3	P62318	126 aa	Known RBP	9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	SPATA45	Q537H7	98 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	IGFL4	Q6B9Z1	124 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	NDUFA11	Q86Y39	141 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	DLX4	Q92988	240 aa	Predicted RBP	9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	IL36B	Q9NZH7	164 aa		9.49	□□□□□ -0.89
PATJ-215	ENST00000635137	SNURFL	B1AK76	121 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137		Q0VG73	95 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	TMEM78	Q5T7P6	136 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	RNF182	Q8N6D2	247 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	NHLRC2	Q8NBF2	726 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	ZNF738	Q8NE65	137 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	ZNF492	Q9P255	531 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	SOCS3	O14543	225 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	IGLC3	P0DOY3	106 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	HLA-DMB	P28068	263 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	KIAA1644	Q3SXP7	199 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	RBPMS2	Q6ZRY4	209 aa	Known RBP	9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	OR4B1	Q8NGF8	309 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	OR10J6P	Q8NGY7	276 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	MS4A6A	Q9H2W1	248 aa		9.48	□□□□□ -0.89
PATJ-215	ENST00000635137	TRAV9-1	A0A075B6T8	112 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	SPINK4	O60575	86 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	IGKV2D-40	P01614	121 aa	Predicted RBP	9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	MAJIN	Q3KP22	176 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	PRR27	Q6MZM9	219 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	C9orf47	Q6ZRZ4	202 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	DYNLRB2	Q8TF09	96 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	LINC00477	Q96M19	166 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	SIGLEC8	Q9NYZ4	499 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	LENEP	Q9Y5L5	61 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	IGKV3-7	A0A075B6H7	116 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	TRAV2	A0A0B4J234	112 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	COX8C	Q7Z4L0	72 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	DCANP1	Q8TF63	244 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	DUX3	Q96PT4	197 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	PRR25	Q96S07	402 aa		9.47	□□□□□ -0.89
PATJ-215	ENST00000635137	RNASE7	Q9H1E1	156 aa	Known RBP	9.47	□□□□□ -0.89
PATJ-215	ENST00000635137		P01737	135 aa		9.46	□□□□□ -0.9
PATJ-215	ENST00000635137	NUDT10	Q8NFP7	164 aa		9.46	□□□□□ -0.9
PATJ-215	ENST00000635137	NUDT11	Q96G61	164 aa		9.46	□□□□□ -0.9
PATJ-215	ENST00000635137	LAMTOR2	Q9Y2Q5	125 aa		9.46	□□□□□ -0.9
PATJ-215	ENST00000635137		V9GYV3	84 aa		9.46	□□□□□ -0.9
PATJ-215	ENST00000635137	C20orf202	A1L168	122 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	CSN3	P07498	182 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	PMCH	P20382	165 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	AMT	P48728	403 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	ZNF138	P52744	262 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137		Q6ZN92	141 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	ATOH7	Q8N100	152 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	VGLL1	Q99990	258 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	UQCR10	Q9UDW1	63 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	TRAV25	A0A0B4J276	109 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	EDN2	P20800	178 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	PTTG1IP	P53801	180 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	CT83	Q5H943	113 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	NIT1	Q86X76	327 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137	WFDC3	Q8IUB2	231 aa		9.45	□□□□□ -0.9
PATJ-215	ENST00000635137		A8MWL6	223 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	PRAC2	D3DTV9	90 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137		K7EQG2	157 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	C3orf79	P0CE67	100 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	NSUN5P1	Q3KNT7	163 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	FAM19A2	Q8N3H0	131 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	TRBV7-9	A0A0J9YWB2	115 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	C19orf71	A6NCJ1	209 aa		9.44	□□□□□ -0.9
PATJ-215	ENST00000635137	HNRNPA3	P51991	378 aa	Known RBP	9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms