RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CD3DP04234 171 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 TPT1P13693 172 aaKnown RBP3.47□□□□□ -1.85
SDCBP-213ENST00000630925 HLA-DMBP28068 263 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 ZNF876PQ49A33 203 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 GUSBP11Q6P575 273 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 C3orf56Q8N813 242 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 SMIM14Q96QK8 99 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 SLC39A9Q9NUM3 307 aa3.47□□□□□ -1.85
SDCBP-213ENST00000630925 POLQO75417 2590 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 GON4LQ3T8J9 2241 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 NOTCH2Q04721 2471 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 RBAKDNA6NC62 111 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 GYPBP06028 91 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 LINC00310P59036 64 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 MPV17L2Q567V2 206 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 RHOXF1Q8NHV9 184 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 DSCR8Q96T75 97 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 NPCDR1Q9BY65 106 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.46□□□□□ -1.86
SDCBP-213ENST00000630925 ZFHX3Q15911 3703 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 ANAPC1Q9H1A4 1944 aa3.46□□□□□ -1.86
SDCBP-213ENST00000630925 PCNX3Q9H6A9 2034 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 CFDP00746 253 aaPredicted RBP3.45□□□□□ -1.86
SDCBP-213ENST00000630925 IGHV3-11P01762 117 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 IGHV3-23P01764 117 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 IGHV3-13P01766 116 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 COX7CP15954 63 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 GNG11P61952 73 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 IGFL3Q6UXB1 125 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 TIFABQ6ZNK6 161 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 SPATA12Q7Z6I5 190 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 HHLA3Q9XRX5 114 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 COL1A2P08123 1366 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 HELZP42694 1942 aaKnown RBP3.45□□□□□ -1.86
SDCBP-213ENST00000630925 C19orf84I3L1E1 186 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 PROP1O75360 226 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 ANK1P16157 1881 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 KISS1Q15726 138 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 MIC13Q5XKP0 118 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 FAM104BQ5XKR9 115 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 HEPN1Q6WQI6 88 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 C10orf105Q8TEF2 133 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 RMI2Q96E14 147 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 OR5V1Q9UGF6 321 aa3.45□□□□□ -1.86
SDCBP-213ENST00000630925 ARHGEF17Q96PE2 2063 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-213ENST00000630925 DSCAMO60469 2012 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 MYH8P13535 1937 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 MYLKQ15746 1914 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 SETD2Q9BYW2 2564 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-213ENST00000630925 IGKV6D-41A0A0C4DH26 115 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 SRRM5B3KS81 715 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 BMPR1BO00238 502 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 LEPROTO15243 131 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 TCL1BO95988 128 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 CGB3P0DN86 165 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 CGB7P0DN87 165 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 ASIPP42127 132 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 ORMDL3Q8N138 153 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 YPEL2Q96QA6 119 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 BAZ2BQ9UIF8 2168 aaKnown RBP3.44□□□□□ -1.86
SDCBP-213ENST00000630925 CREBBPQ92793 2442 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 TET2Q6N021 2002 aaPredicted RBP3.44□□□□□ -1.86
SDCBP-213ENST00000630925 MCM3APO60318 1980 aa3.44□□□□□ -1.86
SDCBP-213ENST00000630925 IGHV1OR15-9A0A0B4J2B8 117 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 FAM24AA6NFZ4 105 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 SNCGO76070 127 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 HINT1P49773 126 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-213ENST00000630925 CMC4P56277 68 aaPredicted RBP3.43□□□□□ -1.86
SDCBP-213ENST00000630925 NPC2P61916 151 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 RPL18Q07020 188 aaKnown RBP3.43□□□□□ -1.86
SDCBP-213ENST00000630925 SS18Q15532 418 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 ZNF678Q5SXM1 525 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 GFI1BQ5VTD9 330 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 PATE2Q6UY27 113 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 CAMK2N2Q96S95 79 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 DPH3P1Q9H4G8 78 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 OBSL1O75147 1896 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 SHROOM3Q8TF72 1996 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 GREB1Q4ZG55 1949 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 PLXNA4Q9HCM2 1894 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 LAMA1P25391 3075 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 TRAV1-1A0A0B4J248 108 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 HLA-DQA1P01909 254 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 IGLC2P0DOY2 106 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 IGLC3P0DOY3 106 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 SLC25A4P12235 298 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 ADCYAP1P18509 176 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 UBE2SQ16763 222 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 SLC25A26Q70HW3 274 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 FGF13Q92913 245 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 S100A16Q96FQ6 103 aaKnown RBP3.43□□□□□ -1.86
SDCBP-213ENST00000630925 CHCHD5Q9BSY4 110 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 PLA2G12AQ9BZM1 189 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 DOPEY2Q9Y3R5 2298 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 TSC2P49815 1807 aa3.43□□□□□ -1.86
SDCBP-213ENST00000630925 MYO18AQ92614 2054 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms