RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 TMEM183AQ8IXX5 376 aa17.75■□□□□ 0.43
CAPNS1-216ENST00000628306 YPEL4Q96NS1 127 aa17.75■□□□□ 0.43
CAPNS1-216ENST00000628306 A0A0J9YWU9 116 aa17.74■□□□□ 0.43
CAPNS1-216ENST00000628306 PGPEP1LA6NFU8 196 aa17.74■□□□□ 0.43
CAPNS1-216ENST00000628306 FLI1Q01543 452 aaPredicted RBP17.74■□□□□ 0.43
CAPNS1-216ENST00000628306 OR10G8Q8NGN5 311 aa17.74■□□□□ 0.43
CAPNS1-216ENST00000628306 PPP1R14DQ9NXH3 145 aa17.74■□□□□ 0.43
CAPNS1-216ENST00000628306 LOC102724200A0A096LPH7 203 aaPredicted RBP17.73■□□□□ 0.43
CAPNS1-216ENST00000628306 COLCA2A8K830 154 aa17.73■□□□□ 0.43
CAPNS1-216ENST00000628306 TCF24Q7RTU0 167 aa17.73■□□□□ 0.43
CAPNS1-216ENST00000628306 C16orf92Q96LL3 132 aa17.73■□□□□ 0.43
CAPNS1-216ENST00000628306 PSG8Q9UQ74 426 aa17.73■□□□□ 0.43
CAPNS1-216ENST00000628306 SAPCD1Q5SSQ6 148 aa17.72■□□□□ 0.43
CAPNS1-216ENST00000628306 CEMP1Q6PRD7 247 aaPredicted RBP17.72■□□□□ 0.43
CAPNS1-216ENST00000628306 Q86TA4 180 aa17.72■□□□□ 0.43
CAPNS1-216ENST00000628306 RPH3ALQ9UNE2 315 aa17.72■□□□□ 0.43
CAPNS1-216ENST00000628306 RYR1P21817 5038 aa17.71■□□□□ 0.43
CAPNS1-216ENST00000628306 NUPR2A6NF83 97 aa17.71■□□□□ 0.43
CAPNS1-216ENST00000628306 PFN1P07737 140 aaKnown RBP17.71■□□□□ 0.43
CAPNS1-216ENST00000628306 ZNF492Q9P255 531 aa17.71■□□□□ 0.43
CAPNS1-216ENST00000628306 TRAV2A0A0B4J234 112 aa17.69■□□□□ 0.42
CAPNS1-216ENST00000628306 ID1P41134 155 aa17.69■□□□□ 0.42
CAPNS1-216ENST00000628306 ERVFC1-1P60608 527 aa17.69■□□□□ 0.42
CAPNS1-216ENST00000628306 BTF3L4Q96K17 158 aa17.69■□□□□ 0.42
CAPNS1-216ENST00000628306 TP53TG1Q9Y2A0 90 aa17.69■□□□□ 0.42
CAPNS1-216ENST00000628306 TRBV24-1A0A075B6N3 115 aa17.68■□□□□ 0.42
CAPNS1-216ENST00000628306 S100PP25815 95 aa17.68■□□□□ 0.42
CAPNS1-216ENST00000628306 ELOBQ15370 118 aa17.68■□□□□ 0.42
CAPNS1-216ENST00000628306 DCANP1Q8TF63 244 aa17.68■□□□□ 0.42
CAPNS1-216ENST00000628306 PYGO2Q9BRQ0 406 aa17.68■□□□□ 0.42
CAPNS1-216ENST00000628306 TRAV8-1A0A0A6YYK1 113 aa17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 MGST1P10620 155 aaKnown RBP17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 RPL11P62913 178 aaKnown RBP17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 OR5I1Q13606 314 aa17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 C9orf47Q6ZRZ4 202 aa17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 PRNTQ86SH4 94 aa17.67■□□□□ 0.42
CAPNS1-216ENST00000628306 TRAV9-1A0A075B6T8 112 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 HLA-DMBP28068 263 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 IBA57Q5T440 356 aaKnown RBP17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 IGFL4Q6B9Z1 124 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 Q6ZWC4 215 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 FAM24BQ8N5W8 94 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 LENEPQ9Y5L5 61 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 V9GYV3 84 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 FAT2Q9NYQ8 4349 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 C19orf71A6NCJ1 209 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 ZNF705FA8MVS1 300 aaPredicted RBP17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 PAFAH1B2P68402 229 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 KCNIP4Q6PIL6 250 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 SGK494Q96LW2 274 aa17.66■□□□□ 0.42
CAPNS1-216ENST00000628306 TRAV25A0A0B4J276 109 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 SPRY2O43597 315 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 DEFB135Q30KP9 77 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 CT83Q5H943 113 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 RNF182Q8N6D2 247 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 LINC00477Q96M19 166 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 MS4A6AQ9H2W1 248 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 IL36BQ9NZH7 164 aa17.65■□□□□ 0.42
CAPNS1-216ENST00000628306 IGKV2-40A0A087WW87 121 aaPredicted RBP17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 TRBV7-9A0A0J9YWB2 115 aa17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 PRAC2D3DTV9 90 aa17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 K7EQG2 157 aa17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 IGKV2D-40P01614 121 aaPredicted RBP17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 NUDT10Q8NFP7 164 aa17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 NUDT11Q96G61 164 aa17.64■□□□□ 0.41
CAPNS1-216ENST00000628306 DNAH2Q9P225 4427 aa17.63■□□□□ 0.41
CAPNS1-216ENST00000628306 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.63■□□□□ 0.41
CAPNS1-216ENST00000628306 OR4B1Q8NGF8 309 aa17.63■□□□□ 0.41
CAPNS1-216ENST00000628306 VGLL1Q99990 258 aa17.63■□□□□ 0.41
CAPNS1-216ENST00000628306 NDFIP1Q9BT67 221 aa17.63■□□□□ 0.41
CAPNS1-216ENST00000628306 NPIPB6E9PJ23 425 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 ZNF138P52744 262 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 ODF3L2Q3SX64 289 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 NHLRC2Q8NBF2 726 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 RNF183Q96D59 192 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 DAZAP1Q96EP5 407 aaKnown RBP17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 C20orf173Q96LM9 149 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 AGPAT4-IT1Q9H0P7 198 aa17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 RNASE7Q9H1E1 156 aaKnown RBP17.62■□□□□ 0.41
CAPNS1-216ENST00000628306 GATCO43716 136 aaKnown RBP17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 RAB5AP20339 215 aa17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 SNRPD3P62318 126 aaKnown RBP17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 TMEM78Q5T7P6 136 aa17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 ZNF738Q8NE65 137 aa17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 PKHD1P08F94 4074 aa17.61■□□□□ 0.41
CAPNS1-216ENST00000628306 FAM231BA6NCW3 169 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 CT45A10P0DMU9 189 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 LGALS9CQ6DKI2 356 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 GBGT1Q8N5D6 347 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 OR10J6PQ8NGY7 276 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 SPAG8Q99932 426 aaPredicted RBP17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 KLK5Q9Y337 293 aaPredicted RBP17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 URGCP-MRPS24S4R325 110 aa17.6■□□□□ 0.41
CAPNS1-216ENST00000628306 DNAH17Q9UFH2 4485 aa17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 SMIM27A0A1W2PRY6 76 aa17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 ZNF705GA8MUZ8 300 aaPredicted RBP17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 TYMSP04818 313 aa17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 APOC4P55056 127 aa17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 ZC2HC1AQ96GY0 325 aa17.59■□□□□ 0.41
CAPNS1-216ENST00000628306 FAM210BQ96KR6 192 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms