RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PTPN13Q12923 2485 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 SLC50A1Q9BRV3 221 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 C11orf21Q9P2W6 132 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 POLQO75417 2590 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 TRAV8-6A0A0B4J262 113 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 TNFRSF6BO95407 300 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
VARS2-213ENST00000625423 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 C7orf71A4D174 169 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 PPBPP02775 128 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 LEPP41159 167 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 RBX1P62877 108 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 CSPG4Q6UVK1 2322 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 CENPVL3A0A0U1RRI6 287 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 GNLYP22749 145 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
VARS2-213ENST00000625423 SMAD7O15105 426 aaKnown RBP8.65□□□□□ -1.02
VARS2-213ENST00000625423 NMUP48645 174 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 EEF1AKMT3Q96AZ1 226 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 SEC11AP67812 179 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 Q6ZQT7 251 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 METTL26Q96S19 204 aa8.65□□□□□ -1.02
VARS2-213ENST00000625423 ZFHX3Q15911 3703 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 CUBNO60494 3623 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 TRGV3P03979 118 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 EFNA4P52798 201 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 LMO4P61968 165 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 TMEM78Q5T7P6 136 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 TMEM219Q86XT9 240 aa8.65□□□□□ -1.03
VARS2-213ENST00000625423 PEF1Q9UBV8 284 aaKnown RBP8.65□□□□□ -1.03
VARS2-213ENST00000625423 A1L4Q6 167 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 FCER1GP30273 86 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 LINC00527Q9UJ94 153 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 NPFFO15130 113 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
VARS2-213ENST00000625423 IGHV3OR16-10A0A075B7F0 116 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 TRBV7-1A0A0A6YYK4 115 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 LINC01546A6NGU7 62 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 C5orf56Q8N8D9 126 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 NPFFR1Q9GZQ6 430 aa8.64□□□□□ -1.03
VARS2-213ENST00000625423 USP9XQ93008 2570 aaPredicted RBP8.63□□□□□ -1.03
VARS2-213ENST00000625423 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
VARS2-213ENST00000625423 CCDC168Q8NDH2 2452 aa8.63□□□□□ -1.03
VARS2-213ENST00000625423 PRSS1P07477 247 aa8.63□□□□□ -1.03
VARS2-213ENST00000625423 ATP5G2Q06055 141 aa8.63□□□□□ -1.03
VARS2-213ENST00000625423 TMEM158Q8WZ71 300 aa8.63□□□□□ -1.03
VARS2-213ENST00000625423 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 IGHV7-4-1A0A0J9YVY3 117 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 ODF1Q14990 250 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 NAA38Q9BRA0 125 aaKnown RBP8.62□□□□□ -1.03
VARS2-213ENST00000625423 UFC1Q9Y3C8 167 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 HSD52Q0P140 79 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 OR2K2Q8NGT1 345 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 CST9LQ9H4G1 147 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 U3KQE9 123 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 FLNCQ14315 2725 aa8.62□□□□□ -1.03
VARS2-213ENST00000625423 A6NDN8 102 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 SIVA1O15304 175 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 Q8N8P6 123 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
VARS2-213ENST00000625423 IGLV2-18A0A075B6J9 118 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 IGKV2D-26A0A0A0MRZ7 120 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 J3KRW8 73 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 KIR3DS1Q14943 382 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 OR4X2Q8NGF9 303 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 FOXC2Q99958 501 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 TLN2Q9Y4G6 2542 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 TRAV41A0A0B4J266 112 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 H3BRM9 83 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 IGF1P05019 195 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 CDKN1BP46527 198 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 SPANXN1Q5VSR9 72 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 IGSF10Q6WRI0 2623 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 SMIM15Q7Z3B0 74 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 ZMAT4Q9H898 229 aa8.61□□□□□ -1.03
VARS2-213ENST00000625423 GAGE12BA1L429 117 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 PRR9Q5T870 116 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 GAGE10A6NGK3 116 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 H3BUT2 72 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 PRB1P04280 392 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 SMIM17P0DL12 118 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 TM4SF20Q53R12 229 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 RAB37Q96AX2 223 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 HIF1ANQ9NWT6 349 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 CFAP46Q8IYW2 2715 aa8.6□□□□□ -1.03
VARS2-213ENST00000625423 H3BVH4 76 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms