RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 VAMP8Q9BV40 100 aa15.03■□□□□ -0
PCDHB11-202ENST00000624887 PRSS57Q6UWY2 283 aa15.02■□□□□ -0
PCDHB11-202ENST00000624887 PEF1Q9UBV8 284 aaKnown RBP15.02■□□□□ -0
PCDHB11-202ENST00000624887 TMEM213A2RRL7 107 aa15.02□□□□□ -0.01
PCDHB11-202ENST00000624887 M0QZ24 198 aa15.02□□□□□ -0.01
PCDHB11-202ENST00000624887 DOPEY2Q9Y3R5 2298 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 ZANQ9Y493 2812 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 TMEM89A2RUT3 159 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 FAM181BA6NEQ2 426 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 SOCS3O14543 225 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 HIST1H1AQ02539 215 aaPredicted RBP15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 TDRG1Q3Y452 100 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 Q6YL49 198 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 C20orf173Q96LM9 149 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 VPREB3Q9UKI3 123 aa15.01□□□□□ -0.01
PCDHB11-202ENST00000624887 IGHV7-4-1A0A0J9YVY3 117 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 DAZ1Q9NQZ3 744 aaKnown RBP15□□□□□ -0.01
PCDHB11-202ENST00000624887 FAM104BQ5XKR9 115 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 KRTAP1-3Q8IUG1 177 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 ZNF738Q8NE65 137 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 Q96MF0 132 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 CNFNQ9BYD5 112 aa15□□□□□ -0.01
PCDHB11-202ENST00000624887 TM4SF20Q53R12 229 aa14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 CYB5R2Q6BCY4 276 aa14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 RHPN1-AS1Q9BWJ2 59 aa14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 LENEPQ9Y5L5 61 aa14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 PRRC2AP48634 2157 aaKnown RBP14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 NAV2Q8IVL1 2488 aa14.99□□□□□ -0.01
PCDHB11-202ENST00000624887 K7EMT4 169 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 EBLN2Q6P2I7 272 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 ABCA12Q86UK0 2595 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 IGHV1-24A0A0C4DH33 117 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 MUC21A0A0G2JKD1 596 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 MUC21A0A140T8X8 626 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 FAM106AQ4KMX7 169 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 MUC21Q5SSG8 566 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 U3KQK5 164 aa14.98□□□□□ -0.01
PCDHB11-202ENST00000624887 IGKV3D-20A0A0C4DH25 116 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 C2orf70A6NJV1 201 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 TWIST1Q15672 202 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 COL5A1-AS1Q5SY13 56 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 AMN1Q8IY45 258 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 SMPXQ9UHP9 88 aa14.97□□□□□ -0.01
PCDHB11-202ENST00000624887 OVOL1O14753 267 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 NPSP0C0P6 89 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 PMCHL1Q16048 86 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 C10orf99Q6UWK7 81 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 LINC00477Q96M19 166 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 C11orf21Q9P2W6 132 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 PAM16Q9Y3D7 125 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 RPL11P62913 178 aaKnown RBP14.96□□□□□ -0.01
PCDHB11-202ENST00000624887 NBPF19A0A087WUL8 3843 aa14.95□□□□□ -0.02
PCDHB11-202ENST00000624887 TMEM191AQ9H0A3 160 aa14.95□□□□□ -0.02
PCDHB11-202ENST00000624887 D6R8Y8 96 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 CSN3P07498 182 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 MRPL51Q4U2R6 128 aaKnown RBP14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 ORMDL3Q8N138 153 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 OR10J6PQ8NGY7 276 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 OR5AL1P0C617 328 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 ZNF702PQ9H963 129 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 APCP25054 2843 aa14.94□□□□□ -0.02
PCDHB11-202ENST00000624887 HOXA3O43365 443 aaPredicted RBP14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 FOXE3Q13461 319 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 UFC1Q9Y3C8 167 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 LEPROTL1O95214 131 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 PRELID3AQ96N28 172 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 TMEM70Q9BUB7 260 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 AP5S1Q9NUS5 200 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 MSRB1Q9NZV6 116 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 UQCR10Q9UDW1 63 aa14.93□□□□□ -0.02
PCDHB11-202ENST00000624887 PRR9Q5T870 116 aa14.92□□□□□ -0.02
PCDHB11-202ENST00000624887 PRSS3P2Q8NHM4 247 aa14.92□□□□□ -0.02
PCDHB11-202ENST00000624887 HELZ2Q9BYK8 2649 aaKnown RBP14.92□□□□□ -0.02
PCDHB11-202ENST00000624887 CREBBPQ92793 2442 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 CRXO43186 299 aaPredicted RBP14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 ELANEP08246 267 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 MYOZ3Q8TDC0 251 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 IGKV3-7A0A075B6H7 116 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 EDN2P20800 178 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 FA2HQ7L5A8 372 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 ZFAND2AQ8N6M9 145 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 MXRA5Q9NR99 2828 aa14.91□□□□□ -0.02
PCDHB11-202ENST00000624887 Q6ZQT7 251 aa14.9□□□□□ -0.02
PCDHB11-202ENST00000624887 WFDC11Q8NEX6 87 aa14.9□□□□□ -0.02
PCDHB11-202ENST00000624887 OR8A1Q8NGG7 326 aa14.9□□□□□ -0.02
PCDHB11-202ENST00000624887 IGLC3P0DOY3 106 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 CKS2P33552 79 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 IFI27P40305 119 aaPredicted RBP14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 SAMD13Q5VXD3 122 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 LINC00173Q6ZV60 143 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 RNF185Q96GF1 192 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 FAM19A4Q96LR4 140 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 SIGLEC8Q9NYZ4 499 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 TEX15Q9BXT5 2789 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 LGALS1P09382 135 aaKnown RBP14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 DEFB1P60022 68 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 SPATA45Q537H7 98 aa14.89□□□□□ -0.03
PCDHB11-202ENST00000624887 TRBV7-9A0A0J9YWB2 115 aa14.88□□□□□ -0.03
PCDHB11-202ENST00000624887 SYS1-DBNDD2H3BUS1 97 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms