RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 C19orf73Q9NVV2 129 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 AURKAIP1Q9NWT8 199 aaPredicted RBP13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 ZFP30Q9Y2G7 519 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 HLA-DRB4X5D2U9 266 aa13.2□□□□□ -0.3
PTCHD3-202ENST00000622555 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 S100PP25815 95 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 PRR25Q96S07 402 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 SRD5A3Q9H8P0 318 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 H3BMM0 161 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 K7EN84 100 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 MGST1P10620 155 aaKnown RBP13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 SAPCD1Q5SSQ6 148 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 TMEM183AQ8IXX5 376 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
PTCHD3-202ENST00000622555 G3V4G9 280 aa13.18□□□□□ -0.3
PTCHD3-202ENST00000622555 IGLV2-8P01709 118 aa13.18□□□□□ -0.3
PTCHD3-202ENST00000622555 TYMSP04818 313 aa13.18□□□□□ -0.3
PTCHD3-202ENST00000622555 S100A6P06703 90 aa13.18□□□□□ -0.3
PTCHD3-202ENST00000622555 STHQ8IWL8 128 aa13.18□□□□□ -0.3
PTCHD3-202ENST00000622555 TRGC2P03986 189 aa13.17□□□□□ -0.3
PTCHD3-202ENST00000622555 EGFEM1PQ0D2K5 195 aa13.17□□□□□ -0.3
PTCHD3-202ENST00000622555 SMIM12Q96EX1 92 aa13.17□□□□□ -0.3
PTCHD3-202ENST00000622555 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
PTCHD3-202ENST00000622555 KRTAP10-11P60412 298 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 SAMD5Q5TGI4 173 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 DEFB125Q8N687 156 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 OR10G8Q8NGN5 311 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 LENEPQ9Y5L5 61 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 KCNIP4Q6PIL6 250 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 ZC2HC1AQ96GY0 325 aa13.16□□□□□ -0.3
PTCHD3-202ENST00000622555 J3KRW8 73 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 GCGP01275 180 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 OR5I1Q13606 314 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 LINC00518Q8N0U6 118 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 BTF3L4Q96K17 158 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 ODF3Q96PU9 254 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
PTCHD3-202ENST00000622555 A8MTW9 85 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 HOXA5P20719 270 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 LEPP41159 167 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 AMTNQ6UX39 209 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 FRZBQ92765 325 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 CMYA5Q8N3K9 4069 aa13.14□□□□□ -0.31
PTCHD3-202ENST00000622555 TRBV7-9A0A0J9YWB2 115 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 RBMY1BA6NDE4 496 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 RBMY1EA6NEQ0 496 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 RBMY1DP0C7P1 496 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 CRISP2P16562 243 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 FABP9Q0Z7S8 132 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 TRPT1Q86TN4 253 aaKnown RBP13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 Q8N1Y9 231 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 TRAV9-1A0A075B6T8 112 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 M0R2Z0 102 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 GPX1P07203 203 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 TSPOP30536 169 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 FXYD7P58549 80 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 SPINK13Q1W4C9 94 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 COX8CQ7Z4L0 72 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 CLUHP3Q96NS8 147 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 OSTCQ9NRP0 149 aa13.13□□□□□ -0.31
PTCHD3-202ENST00000622555 A0A1W2PPQ1 181 aa13.12□□□□□ -0.31
PTCHD3-202ENST00000622555 TRGC1P0CF51 173 aa13.12□□□□□ -0.31
PTCHD3-202ENST00000622555 PRR9Q5T870 116 aa13.12□□□□□ -0.31
PTCHD3-202ENST00000622555 IL36BQ9NZH7 164 aa13.12□□□□□ -0.31
PTCHD3-202ENST00000622555 V9GYV3 84 aa13.12□□□□□ -0.31
PTCHD3-202ENST00000622555 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
PTCHD3-202ENST00000622555 RNASE4P34096 147 aaKnown RBP13.11□□□□□ -0.31
PTCHD3-202ENST00000622555 CDKN1BP46527 198 aa13.11□□□□□ -0.31
PTCHD3-202ENST00000622555 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
PTCHD3-202ENST00000622555 MGAM2Q2M2H8 2515 aa13.11□□□□□ -0.31
PTCHD3-202ENST00000622555 KLLNB2CW77 178 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 FAM162BQ5T6X4 162 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 TRAV12-2A0A075B6T6 113 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 CRIP1P50238 77 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 AKR1D1P51857 326 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 RNASE7Q9H1E1 156 aaKnown RBP13.1□□□□□ -0.31
PTCHD3-202ENST00000622555 SH2D1AO60880 128 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms