RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 SP5Q6BEB4 398 aaPredicted RBP13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 PKIGQ9Y2B9 76 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 C3orf56Q8N813 242 aa13.84□□□□□ -0.19
HMGXB3-206ENST00000613459 NPYP01303 97 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 PRR20EP86478 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 PRR20CP86479 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 PRR20DP86480 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 PRR20BP86481 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 PRR20AP86496 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 TCTEX1D4Q5JR98 221 aa13.83□□□□□ -0.19
HMGXB3-206ENST00000613459 Q8NFD4 153 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 MRAPQ8TCY5 172 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 PFN2P35080 140 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 HAMPP81172 84 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 KLK9Q9UKQ9 250 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 THSD7BQ9C0I4 1608 aa13.83□□□□□ -0.2
HMGXB3-206ENST00000613459 RNF223E7ERA6 249 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 J3QQQ9 107 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 ZNRF2Q8NHG8 242 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 C12orf74Q32Q52 190 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 ZC2HC1AQ96GY0 325 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 LRRK1Q38SD2 2015 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 FOXI2Q6ZQN5 318 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 IGLC7A0M8Q6 106 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 NDUFS7O75251 213 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 VWC2Q2TAL6 325 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 CCL25O15444 150 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 LY6HO94772 140 aa13.82□□□□□ -0.2
HMGXB3-206ENST00000613459 G3V318 75 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 TMEM258P61165 79 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 SCRT2Q9NQ03 307 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 AKAP6Q13023 2319 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 H3BMG7 143 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
HMGXB3-206ENST00000613459 K7ERJ3 54 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 ACYP1P07311 99 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 GAGE7O76087 117 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 GAGE12FP0CL80 117 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 GAGE12GP0CL81 117 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 GAGE12IP0CL82 117 aa13.8□□□□□ -0.2
HMGXB3-206ENST00000613459 RNF152Q8N8N0 203 aa13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 RNASE8Q8TDE3 154 aaKnown RBP13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 MPDZO75970 2070 aa13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 LY6G6EA0A0G2JKS1 128 aa13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 U3KQA8 63 aa13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 IL15RAQ13261 267 aa13.79□□□□□ -0.2
HMGXB3-206ENST00000613459 MYLKQ15746 1914 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 IGHV3-16A0A0C4DH30 117 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 HERV-K104P63124 156 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 C15orf53Q8NAA6 179 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 Q6ZVH6 145 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 ZNF491Q8N8L2 437 aa13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 FNDC1Q4ZHG4 1894 aaPredicted RBP13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 TCF20Q9UGU0 1960 aaKnown RBP13.78□□□□□ -0.2
HMGXB3-206ENST00000613459 SPTBN2O15020 2390 aa13.77□□□□□ -0.21
HMGXB3-206ENST00000613459 GAGE6Q13070 117 aa13.77□□□□□ -0.21
HMGXB3-206ENST00000613459 TRAV25A0A0B4J276 109 aa13.77□□□□□ -0.21
HMGXB3-206ENST00000613459 K7EN84 100 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 CFC1BP0CG36 223 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 CFC1P0CG37 223 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 DKK2Q9UBU2 259 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 CR1LQ2VPA4 569 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 PRSS47A8MTI9 375 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 SHISA9B4DS77 424 aa13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 COA6Q5JTJ3 125 aaKnown RBP13.76□□□□□ -0.21
HMGXB3-206ENST00000613459 RSPO1Q2MKA7 263 aaPredicted RBP13.75□□□□□ -0.21
HMGXB3-206ENST00000613459 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
HMGXB3-206ENST00000613459 NTN5Q8WTR8 489 aaPredicted RBP13.75□□□□□ -0.21
HMGXB3-206ENST00000613459 PLXNA4Q9HCM2 1894 aa13.75□□□□□ -0.21
HMGXB3-206ENST00000613459 PLA2G2CQ5R387 149 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 Q96MF0 132 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 DEFB125Q8N687 156 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 TPSG1Q9NRR2 321 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 TEX48A0A1B0GUV7 120 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 H3BQ85 93 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 CFHR3Q02985 330 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 NCOR1O75376 2440 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 WIPF3A6NGB9 483 aa13.74□□□□□ -0.21
HMGXB3-206ENST00000613459 IGHV3-38A0A0C4DH36 116 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 CRYBA4P53673 196 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 COL4A6Q14031 1691 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 FOXE3Q13461 319 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 ORMDL1Q9P0S3 153 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 ZNF503-AS2A6NEH8 195 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 NXPH4O95158 308 aa13.73□□□□□ -0.21
HMGXB3-206ENST00000613459 PRSS29PA6NIE9 313 aa13.72□□□□□ -0.21
HMGXB3-206ENST00000613459 DUX4L9Q6RFH8 374 aaPredicted RBP13.72□□□□□ -0.21
HMGXB3-206ENST00000613459 PRR30Q53SZ7 412 aaPredicted RBP13.72□□□□□ -0.21
HMGXB3-206ENST00000613459 FAM215AQ9Y5M1 114 aa13.72□□□□□ -0.21
HMGXB3-206ENST00000613459 TRAV12-2A0A075B6T6 113 aa13.72□□□□□ -0.21
HMGXB3-206ENST00000613459 SPTBN1Q01082 2364 aaKnown RBP13.71□□□□□ -0.21
HMGXB3-206ENST00000613459 PHF3Q92576 2039 aaKnown RBP13.71□□□□□ -0.21
HMGXB3-206ENST00000613459 SLC25A29Q8N8R3 303 aa13.71□□□□□ -0.21
HMGXB3-206ENST00000613459 CFHR4Q92496 578 aa13.71□□□□□ -0.21
HMGXB3-206ENST00000613459 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 HOXB4P17483 251 aaPredicted RBP13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 AMTNQ6UX39 209 aa13.7□□□□□ -0.22
HMGXB3-206ENST00000613459 BAALC-AS2P0C853 105 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms